BQ623664

Overview
NameBQ623664
Unique NameBQ623664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:931..1618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 6.376e-88
Identity = 156/208 (75.00%), Postives = 179/208 (86.06%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALRVG+DLSAFY CDM +    L ++++ RQF+ +C+IAGTVDFIFGNAAAVLQNCDIHAR+PN  Q+NMVTAQGR DPNQNTGIVIQK RIGATSDL  V+GSF TYLGRPWK YSRTV+MQS I+DVI+PAGW+EW GNFAL+TLFY E+QN GAGA TS RVKW  F+VIT+A EAQ +T  +FIAGS+WLGSTGFPFSLGL
Sbjct:  378 QAVALRVGADLSAFYNCDMLAYQDTLYVHSN-RQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 8.327e-88
Identity = 155/208 (74.52%), Postives = 180/208 (86.54%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALRVG+DLSAFY CDM +    L ++++ RQF+ +C+IAGTVDFIFGNAAAVLQNCDIHAR+PN  Q+NMVTAQGR DPNQNTGIVIQK RIGATSDL  V+GSF TYLGRPWK YSRTV+MQS I+D+I+PAGW+EW GNFAL+TLFY E+QN+GAGA TS RVKW  F+VIT+A EAQ +T  +FIAGS+WLGSTGFPFSLGL
Sbjct:  378 QAVALRVGADLSAFYNCDMLAYQDTLYVHSN-RQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 5.967e-86
Identity = 156/208 (75.00%), Postives = 171/208 (82.21%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALRVGSD SAFY CDM +    L ++++ RQF+  C+IAGTVDFIFGNAA VLQ+CDIHARRPN  Q+NMVTAQGR DPNQNTGIVIQKCRIGATSDL +VKGSF TYLGRPWK YS+TV+MQS ISDVI P GW EW+G FAL+TL Y EY NTGAGA T+NRVKW  FKVIT AAEAQ YTA  FI G  WL STGFPFSLGL
Sbjct:  386 QAVALRVGSDFSAFYNCDMLAYQDTLYVHSN-RQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.329e-85
Identity = 153/208 (73.56%), Postives = 171/208 (82.21%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVAL VGSDLSAFYRCDM +    L ++++ RQF+  C++AGTVDFIFGN AAV Q+CDIHARRP   Q+NMVTAQGR DPNQNTGIVIQKCRIGATSDL  V+ SF TYLGRPWK YSRTV+MQS I+DVI PAGW+EW+GNFALDTLFY EY NTGAGA TS RVKW   KVIT++ EAQ YT   FIAG +WL STGFPFSLGL
Sbjct:  377 QAVALCVGSDLSAFYRCDMLAYQDTLYVHSN-RQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 1.244e-83
Identity = 151/208 (72.60%), Postives = 169/208 (81.25%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALRVGSD SAFY+CDM +    L ++++ RQF+  C I GTVDFIFGNAAAVLQ+CDI+ARRPN  Q+NMVTAQGR DPNQNTGIVIQ CRIG TSDLLAVKG+F TYLGRPWK YSRTV+MQSDISDVI P GW+EWSG+FALDTL Y EY N G GA T+NRVKW  +KVIT+  EAQ +TA  FI G  WL STGFPFSL L
Sbjct:  381 QAVALRVGSDFSAFYQCDMFAYQDTLYVHSN-RQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFSLSL 587          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.122e-83
Identity = 151/208 (72.60%), Postives = 172/208 (82.69%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALRVGSDLSAFYRCD+ +    L ++++ RQF+ +C IAGTVDFIFGNAA VLQ+CDIHARRP   Q+NMVTAQGR DPNQNTGIVIQK RIGATSDL  V+ SF TYLGRPWK YSRTVVMQS I++VINPAGW+ W GNFALDTL+Y EYQNTGAGA TS RV W  FKVIT++ EAQ +T  +FIAG +WL +T FPFSLGL
Sbjct:  113 QAVALRVGSDLSAFYRCDILAYQDSLYVHSN-RQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.250e-67
Identity = 123/208 (59.13%), Postives = 156/208 (75.00%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALR GSDLS FYRC        L ++ S RQFY  C I GTVDFIFGNAA VLQNC+I AR+P PN+ N +TAQGR DPNQ+TGI+I  CR+ A SDL  V+ S +T+LGRPWK+YSRTV +++ +  +INPAGW EWSG+FAL+TL+YAEY NTG G+ T+NRVKW  + V+T+ ++   +T  NFIAG++WL +T  PF+ GL
Sbjct:  305 QAVALRSGSDLSVFYRCSFEGYQDTLYVH-SQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.358e-66
Identity = 120/208 (57.69%), Postives = 150/208 (72.12%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALR G+D SAFY+C        L ++ SLRQFY+ C + GT+DFIFGNAAAVLQ C+++AR+PN NQ+N+ TAQGRDDPNQNTGI I  C++ A +DL+ V  SF+TYLGRPWK YSRTV + S +  +I+PAGW EWSG+FAL TL+Y EY+NTG G++T+ RV W  + V TN  E   +T  NFI GS WL S   P  L L
Sbjct:  114 QAVALRSGADFSAFYQCSFVGYQDTLYVH-SLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNIPVYLNL 320          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 1.689e-64
Identity = 121/208 (58.17%), Postives = 153/208 (73.56%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALR GSDLS FY+C   +    L ++++ RQFY  C + GTVDFIFGNAAAVLQNC+I ARRP  ++ N +TAQGR DPNQNTGI+I   R+ A SDL  V GS +TYLGRPW++YSRTV M++ +  +I+P GW EW GNFAL TLFYAE+QNTG GA TS RV W  F+V+ +A+EA  +T   F+AG +W+ S+  PF+ GL
Sbjct:  307 QAVALRSGSDLSVFYQCSFEAYQDTLYVHSN-RQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPR-SKTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.095e-63
Identity = 119/208 (57.21%), Postives = 146/208 (70.19%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALRV SDLS FYRC        L  + SLRQFY    I GT+DFIFG+AAAV QNCDI  RRP  +Q NM+TAQGRDDP+ N+GI IQ  RI A  +  AVKG F++YLGRPWK+YSRTV +++DI ++I+P GW EWSG++AL TL+Y E+ NTGAGA T  RV W  F V+    EA  +T + FI G +W+  TG PFS G+
Sbjct:  313 QAVALRVSSDLSLFYRCSFKGYQDTLFTH-SLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519          
The following BLAST results are available for this feature:
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PME3_CITSI6.376e-8875.00Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI8.327e-8874.52Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME3_ARATH5.967e-8675.00Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PMEU1_SOLLC1.329e-8573.56Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME2_ARATH1.244e-8372.60Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME_DAUCA2.122e-8372.60Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME2_CITSI1.250e-6759.13Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME_ACTDE2.358e-6657.69Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME17_ARATH1.689e-6458.17Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME36_ARATH1.095e-6357.21Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00755 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00755 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623664 ID=BQ623664; Name=BQ623664; organism=Citrus sinensis; type=EST; length=691bp
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCCTAGCATACCAAGACACCTCTCTATGTACACCTCACTTCGC
CAATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGG
AAATGCAGCAGCTGTGTTGCAAAACTGTGACATCCATGCTCGCCGCCCCA
ATCCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAAT
CAGAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGA
TTTACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGA
AGCGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATT
AACCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATT
GTTTTATGCAGAGTATCAAAACACAGGTGCTGGTGCTGACACATCGAATA
GGGTGAAATGGAGCACATTCAAGGTGATTACTAATGCAGCTGAGGCTCAA
ACTTATACAGCTGCGAATTTTATTGCAGGGAGTACTTGGCTTGGCTCCAC
TGGGTTTCCTTTCTCTCTTGGTCTGTGAATTTGTCATACATAGGCCATAG
CTAAGCTCAGCTGCCTATAAATGTCCTAGCTAGCATACATA
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