BQ623682

Overview
NameBQ623682
Unique NameBQ623682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length440
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11041 contig Csv1_Contig11041:491..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of BQ623682 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.684e-40
Identity = 71/109 (65.14%), Postives = 92/109 (84.40%), Query Frame = 3 
Query:  120 KCWPYSFEYRLRVMLAADGGLTLISRVRNIN--GKPFNFSFAYHTYLLVSDISEVRIEGLETLDYLDNLRQRERFTEQGDAVTIESEMDRVYLRSPNVIAVLDHERKRT 440
            K WP+SFE+RLRV L   G L+L SR+RN N  G+PF+++FAYHTY  VSDISEVR+EGLET+DYLDNL+ +ERFTEQGDA+  ESE+D+VYL +P+ IA++DHE+K+T
Sbjct:  140 KIWPHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKT 248

HSP 2 Score: 30.4166 bits (67), Expect = 1.684e-40
Identity = 16/41 (39.02%), Postives = 22/41 (53.66%), Query Frame = 2 
Query:    2 GFARNKLWIIXXXXXXXXXXXXXGKTCVDLLLKPSEEDPEV 124
            GFARN+ W I              K  VDL+L+P+EED ++
Sbjct:  102 GFARNRFWSIDNDPPPLPVNPAI-KAFVDLILRPAEEDLKI 141
The following BLAST results are available for this feature:
BLAST of BQ623682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AAPC_CENCI1.684e-4065.14Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00773 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00773 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623682 ID=BQ623682; Name=BQ623682; organism=Citrus sinensis; type=EST; length=440bp
TGGATTTGCAAGGAACAAATTGTGGATAATTGATGATAATCCTCCACCTA
TGCCCCCAAATGATTCTGATGGAAAAACTTGCGTTGATCTACTGCTTAAA
CCATCTGAAGAGGACCCAGAAGTGCTGGCCTTATAGTTTCGAGTATCGTC
TTAGGGTGATGCTTGCAGCAGATGGAGGTCTGACATTAATATCAAGAGTT
AGGAACATTAATGGCAAACCGTTCAATTTCTCCTTTGCATATCACACATA
CTTGTTGGTTTCTGACATTAGTGAAGTGAGGATAGAAGGCTTGGAGACAC
TTGACTACCTTGACAATCTTCGTCAAAGAGAAAGATTTACAGAACAAGGA
GATGCAGTAACCATTGAATCTGAGATGGATCGAGTTTATCTTCGTTCTCC
TAATGTAATTGCAGTGCTTGATCATGAAAGGAAGAGAACA
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