BQ623700

Overview
NameBQ623700
Unique NameBQ623700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length543
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:621..1162. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 5.091e-56
Identity = 103/123 (83.74%), Postives = 111/123 (90.24%), Query Frame = 3
Query:    3 GPTSWPMGTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 371
            G  S   G ++  GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSLGAAVIYNKDK WDD W+FWVGP +GAAIAAFYHQ+ILRAGA+KALG
Sbjct:  162 GANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALG 284          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.134e-55
Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 3
Query:    3 GPTSWPMGTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 371
            G  S   G ++  GL AEI+GTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSLGAAV+YNKDK WDD W+FWVGP +GAAIAAFYHQ+ILRAGA+KALG
Sbjct:  164 GANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALG 286          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.376e-55
Identity = 101/116 (87.07%), Postives = 106/116 (91.38%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 371
            G  +  GL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN +KAWDDQW+FWVGP IGAA AAFYHQFILRA A+KALG
Sbjct:  164 GYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALG 279          

HSP 2 Score: 26.9498 bits (58), Expect = 1.376e-55
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2
Query:    2 GANELADGYSTGGWIG 49
            GANELADGY+ G  +G
Sbjct:  157 GANELADGYNKGTGLG 172          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.794e-55
Identity = 102/116 (87.93%), Postives = 109/116 (93.97%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 371
            G +   G+AAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKDKAWD  W+FWVGPF GAAIAAFYHQF+LRAGA+KALG
Sbjct:  163 GYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALG 278          

HSP 2 Score: 22.7126 bits (47), Expect = 1.794e-55
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query:    2 GANELADGYSTG 37
            GAN L+DGYS G
Sbjct:  156 GANGLSDGYSIG 167          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 5.181e-55
Identity = 101/113 (89.38%), Postives = 106/113 (93.81%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 362
            G ++  GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQW+FWVGP IGAAIAA YHQ++LRA A K
Sbjct:  168 GYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK 280          

HSP 2 Score: 25.409 bits (54), Expect = 5.181e-55
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2
Query:    2 GANELADGYSTG 37
            GANEL+DGYS G
Sbjct:  161 GANELSDGYSKG 172          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 5.181e-55
Identity = 101/113 (89.38%), Postives = 106/113 (93.81%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 362
            G ++  GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQW+FWVGP IGAAIAA YHQ++LRA A K
Sbjct:  169 GYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK 281          

HSP 2 Score: 25.409 bits (54), Expect = 5.181e-55
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 2
Query:    2 GANELADGYSTG 37
            GANEL+DGYS G
Sbjct:  162 GANELSDGYSKG 173          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.496e-54
Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 3
Query:   39 VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 371
            VG+ AEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGF+VFMVHLATIPITGTGINPARS GAAVIYN  KAWDDQW+FWVGPF+GAAIAAFYHQF+LRAGA+KA G
Sbjct:  168 VGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKAYG 278          

HSP 2 Score: 23.483 bits (49), Expect = 1.496e-54
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2
Query:    2 GANELADGYSTGGWIG 49
            GAN L+DGY+ G  +G
Sbjct:  156 GANMLSDGYNVGVGVG 171          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.139e-54
Identity = 100/123 (81.30%), Postives = 112/123 (91.06%), Query Frame = 3
Query:    3 GPTSWPMGTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 371
            G  +   G ++  GLAAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS+GAAVI+N +KAW + W+FWVGPF+GAAIAAFYHQ+ILRAGA+KALG
Sbjct:  162 GANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALG 284          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.794e-54
Identity = 103/123 (83.74%), Postives = 107/123 (86.99%), Query Frame = 3
Query:    3 GPTSWPMGTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 371
            G  S   G +   GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYNK K WDD W+FWVGPFIGAAIAAFYHQF+LRA   K+LG
Sbjct:  157 GANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLG 279          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.322e-54
Identity = 97/113 (85.84%), Postives = 104/113 (92.04%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 362
            G ++  GL AEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARSLG AVIYNKDKAWDDQW+FWVGP IGAAIAA YHQ++LRA A K
Sbjct:  168 GYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK 280          

HSP 2 Score: 26.9498 bits (58), Expect = 4.322e-54
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2
Query:    2 GANELADGYSTGGWIG 49
            GANEL+DGYS G  +G
Sbjct:  161 GANELSDGYSKGTGLG 176          
The following BLAST results are available for this feature:
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
PIP21_MAIZE5.091e-5683.74Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP22_MAIZE1.134e-5582.11Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP24_ARATH1.376e-5587.07Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP25_ARATH1.794e-5587.93Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP24_MAIZE5.181e-5589.38Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE5.181e-5589.38Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP26_ARATH1.496e-5488.29Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP21_ORYSJ2.139e-5481.30Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP21_ARATH2.794e-5483.74Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP22_ORYSJ4.322e-5485.84Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00791 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00791 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623700 ID=BQ623700; Name=BQ623700; organism=Citrus sinensis; type=EST; length=543bp
TGGGGCCAACGAGCTGGCCGATGGGTACAGCACAGGCGGTTGGATTGGCC
GCCGAGATCATCGGCACCTTTGTGTTGGTTTACACTGTCTTCTCGGCCAC
TGATCCCAAGAGAAGCGCCAGAGACTCCCATGTCCCCGTTTTGGCACCGC
TCCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATC
ACTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTA
CAACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCT
TCATCGGTGCAGCAATTGCGGCTTTCTACCACCAATTCATCTTGAGAGCT
GGAGCTGTCAAGGCTCTTGGTTCATTCAGGAGCCAATCCCGTGTCTGATT
TTAGTTTCGACAAGTGGATTATCCACATCTTCATGGGGTTAATGATTTAA
AATTGGAAAGAAAAAACTGGGAAGGAGTAGAGGTGTGTTAAGTTTCAAAA
AGTGAATAATGAGGGGGGGGGTGATTTGGGCTTTCAAGGAATT
back to top