BQ623708

Overview
NameBQ623708
Unique NameBQ623708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:77..572. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 3.547e-47
Identity = 96/156 (61.54%), Postives = 117/156 (75.00%), Query Frame = 1
Query:    4 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARFVSVQIL 465
            IKVHG   STAT RV A+LYEK+L++EL+PVDM+AG HK+EA L+LNPFGQ+P LE GD  LFESRAITQY+A+E+ +KG +L      K  A   VW +VE  QFDP +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVYEAR    + L
Sbjct:   52 IKVHGVPMSTATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFL 207          
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 6.050e-47
Identity = 98/158 (62.03%), Postives = 119/158 (75.32%), Query Frame = 1
Query:    4 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIA--QEFPDKGTQLTCPGK-PIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARFVSVQILG 468
            IKVHG+  STATQRV  +LYEK LE+E VP+DM AG HK+ ++L+LNPFGQVP LE G+ KLFESRAIT+Y+A   +  ++GT L    K  +A  LVW+EVEA QFDP +SKL WELV+K +FGM TD   VEENEAKLAK+LDVYEAR    + LG
Sbjct:    3 IKVHGNPRSTATQRVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLG 160          
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.050e-47
Identity = 94/156 (60.26%), Postives = 114/156 (73.08%), Query Frame = 1
Query:    4 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARFVSVQILG 468
            IKVHGS  STAT RV A L EKEL++E VPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL     K +  + VW EVE  +F+PP++KL WEL  KP+ GMTTD AAV+E+EA+L+K+LD+YE +    + LG
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLG 158          
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 7.653e-47
Identity = 94/157 (59.87%), Postives = 116/157 (73.89%), Query Frame = 1
Query:    1 GIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTC-PGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARFVSVQILG 468
            G+K+HG   S A  RV A+L EK+L++ELVPV+M+AG+HKKE F++LNPFGQVP  E GD KLFESRAITQYIA  + DKG QL     K +A + VW EVE+ +FDP +SKL +E+V KPM GM TD AAV ENE KL K+LDVYE+R    + LG
Sbjct:    2 GMKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLG 158          

HSP 2 Score: 22.3274 bits (46), Expect = 7.653e-47
Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  446 LSQSKYLACDSFTL 487
            L  SKYL  DSFTL
Sbjct:  151 LKDSKYLGGDSFTL 164          
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 8.736e-46
Identity = 93/156 (59.62%), Postives = 112/156 (71.79%), Query Frame = 1
Query:    4 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLL-VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARFVSVQILG 468
            IKVHGS  STAT RV A L EK+L++ELVPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL        P++ VW EVE  +F+P +SKL WEL  KP+ GMTTD  AV+E+E +L+K+LD+YE R    + LG
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLG 158          
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 4.411e-44
Identity = 88/148 (59.46%), Postives = 108/148 (72.97%), Query Frame = 1
Query:    1 GIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEAR 444
            GIKV G   STAT+RV  +L+EK +++E V V++K GEHKKE F+  NPFG+VP  E GD K+FESRAITQYIA EF DKG  L   GK +A + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE R
Sbjct:    3 GIKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHR 150          

HSP 2 Score: 23.483 bits (49), Expect = 4.411e-44
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  446 LSQSKYLACDSFTL 487
            L +SKYLA D FTL
Sbjct:  151 LGESKYLASDHFTL 164          
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 6.230e-43
Identity = 89/149 (59.73%), Postives = 108/149 (72.48%), Query Frame = 1
Query:    1 GIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEAR 444
            GIKV G   STAT+RV  +L+EK L++E V +++K GEHKKE F+  NPFG+VP  E GD KLFESRAITQYIA  + DKG QL   G K IA + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE R
Sbjct:    3 GIKVFGHPASTATRRVLIALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHR 151          

HSP 2 Score: 23.8682 bits (50), Expect = 6.230e-43
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  446 LSQSKYLACDSFTL 487
            L +SKYLA D FTL
Sbjct:  152 LGESKYLASDKFTL 165          
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 8.462e-41
Identity = 91/159 (57.23%), Postives = 110/159 (69.18%), Query Frame = 1
Query:    1 GIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQ-LTCPGKPIAPLLVWK---EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARFVSVQIL 465
            GIKV G   ST+T+RV  +L+EK L++ELV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT  L    K IA   +     +VEA QFDP +SKL WE V+K  +G+ TD A V E EAKLAK+LDVYEAR    + L
Sbjct:    3 GIKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYL 161          
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 1.596e-39
Identity = 89/159 (55.97%), Postives = 111/159 (69.81%), Query Frame = 1
Query:    1 GIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQ-LTCPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARFVSVQIL 465
            GIKV G   S AT+RV  +L+EK L++ELV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT  L    K I   A + +  +VE  QFDP +SKL +E ++K ++G+TTD A V E EAKLAK+LDVYEAR    + L
Sbjct:    3 GIKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYL 161          
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 133.65 bits (335), Expect = 4.198e-31
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 1
Query:    4 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEA 441
            +K++G   S    RV   L EK L++E+VPVD+  G HK+  FL+LNPFGQ+P L  GD+ LFESRAI +YIA ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVYEA
Sbjct:    4 LKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEA 149          

HSP 2 Score: 21.9422 bits (45), Expect = 4.198e-31
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  446 LSQSKYLACDSFTL 487
            L+++KYLA D FTL
Sbjct:  151 LARNKYLAGDEFTL 164          
The following BLAST results are available for this feature:
BLAST of BQ623708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF6_ARATH3.547e-4761.54Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF_SILCU6.050e-4762.03Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF1_TOBAC6.050e-4760.26Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF_HYOMU7.653e-4759.87Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF2_TOBAC8.736e-4659.62Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF1_ARATH4.411e-4459.46Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GST11_ARATH6.230e-4359.73Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GST16_ARATH8.462e-4157.23Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH1.596e-3955.97Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF3_MAIZE4.198e-3147.26Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00799 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00799 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623708 ID=BQ623708; Name=BQ623708; organism=Citrus sinensis; type=EST; length=497bp
GGCATCAAGGTCCACGGTTCTGTTTTCTCAACTGCTACGCAGCGAGTTTT
CGCATCCCTCTACGAGAAGGAGCTCGAATACGAGCTTGTCCCCGTAGACA
TGAAGGCTGGTGAACACAAAAAGGAGGCCTTCCTTTCTTTGAATCCATTC
GGTCAAGTTCCGGTGCTTGAACACGGCGACCAGAAGCTCTTCGAATCAAG
GGCAATCACCCAATACATCGCCCAGGAGTTTCCAGACAAAGGCACCCAGT
TAACATGCCCAGGCAAGCCCATCGCCCCGTTATTGGTATGGAAGGAGGTG
GAGGCACTCCAGTTCGACCCCCCATCATCGAAGCTCAACTGGGAGCTCGT
GTACAAGCCAATGTTTGGAATGACCACTGATCCAGCTGCGGTTGAAGAAA
ATGAAGCTAAGCTTGCCAAAATTTTAGATGTTTACGAGGCCCGTTTTGTC
TCAGTCCAAATACTTGGCGTGCGACAGCTTCACCTTGGGTCGATTTG
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