BQ623711

Overview
NameBQ623711
Unique NameBQ623711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1807 contig Csv1_Contig1807:130..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Match: U424_DICDI (UPF0424 protein OS=Dictyostelium discoideum GN=DDB_G0277951 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.305e-32
Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 2
Query:  173 DPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVMATIGYELRPNPSTTKQSL 565
            D EL++ IPF    +IKSI I+GG  G+SP+KM+ +IN   IDF +       QEW+L E+ +G + Y T+ +KF ++ ++TL+FP NFG  TT+I++I LKG  T  KR+++ T+ YE +P     K  +
Sbjct:   64 DEELIINIPFGAVTQIKSIIIIGGDGGSSPNKMKAYINNSNIDFGNINSFACTQEWNLHEDFEGQIGYSTKPTKFNNINHLTLYFPSNFGSPTTKIYFIALKGVYTSAKREIVNTV-YESKPQLQDHKSDI 193          

HSP 2 Score: 41.2022 bits (95), Expect = 7.305e-32
Identity = 18/52 (34.62%), Postives = 30/52 (57.69%), Query Frame = 1
Query:    1 HSCEDH------DCSSDWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQQSE 138
            H C D       D   ++SL +++D   ++ LNE V GSV+ +FK+WE + +
Sbjct:    3 HQCNDSSHSHGVDDGIEYSLNRYLDTGTITCLNEKVKGSVRHIFKSWEDRHD 54          
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Match: CA128_HUMAN (UPF0424 protein C1orf128 OS=Homo sapiens GN=C1orf128 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.809e-27
Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 2
Query:  167 DGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVMATIGYELRPNPS 547
            D D ELL  IPFT +VK+K I I+G  D + PS+MR++ N   + F D +  +  Q + L  +L G LEY T+ S+F +V ++++H   NFG DTT++ YIGL+GE T+L+R  +    YE   NP+
Sbjct:   71 DADEELLFNIPFTGNVKLKGIIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPDQTFSLNRDLTGELEYATKISRFSNVYHLSIHISKNFGADTTKVFYIGLRGEWTELRRHEVTICNYEASANPA 196          

HSP 2 Score: 37.3502 bits (85), Expect = 2.809e-27
Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 1
Query:   34 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQQSE 138
            + LY  IDL ++  LNE+  GS + VFK WE++++
Sbjct:   29 YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTD 63          
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Match: CA128_MOUSE (UPF0424 protein C1orf128 homolog OS=Mus musculus GN=Trp26 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.760e-27
Identity = 53/127 (41.73%), Postives = 80/127 (62.99%), Query Frame = 2
Query:  167 DGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVMATIGYELRPNPS 547
            D D ELL  IPFT +VK+K + I+G  D + PS+MR++ N   + F D +  +  Q + L  ++ G LEY T+ S+F +V ++++H   NFG DTT+I YIGL+GE T+L+R  +    YE   NP+
Sbjct:   71 DADEELLFNIPFTGNVKLKGVIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPEQTFSLNRDITGELEYATKISRFSNVYHLSIHISKNFGADTTKIFYIGLRGEWTELRRHEVTICNYEASANPA 196          

HSP 2 Score: 37.3502 bits (85), Expect = 4.760e-27
Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 1
Query:   34 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQQSE 138
            + LY  IDL ++  LNE+  GS + VFK WE++++
Sbjct:   29 YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTD 63          
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Match: CA128_XENLA (UPF0424 protein C1orf128 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.016e-26
Identity = 51/132 (38.64%), Postives = 80/132 (60.61%), Query Frame = 2
Query:  167 DGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVMATIGYELRPNPSTTKQS 562
            D D ELL  IPFT +VK+K I ++G    T P+++R+F N   + F D    +A Q + L  ++ G LEY T+ ++F +V+++++H   NFG + T+I+YIGL+GE T+  R  +    YE   NP+  K S
Sbjct:   69 DDDEELLFNIPFTGNVKLKGIVLIGEDSDTHPAELRLFKNVPHMSFDDT-GREADQTFSLNIDVNGNLEYPTKIARFSNVSHLSIHISKNFGAENTKIYYIGLRGEWTEAHRHEVTICNYEAAANPADHKVS 199          

HSP 2 Score: 41.2022 bits (95), Expect = 3.016e-26
Identity = 16/36 (44.44%), Postives = 28/36 (77.78%), Query Frame = 1
Query:   31 DWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQQSE 138
            ++ L++ IDL K+  LNE+  GS +SVF+AWE++++
Sbjct:   26 EYGLFRKIDLDKLQCLNESREGSGRSVFRAWEERND 61          
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Match: U424_DROPS (UPF0424 protein GA19395 OS=Drosophila pseudoobscura pseudoobscura GN=GA19395 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.925e-26
Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 2
Query:  167 DGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVMATIGYELRPNPSTTKQSL 565
            D D ELL  IPFT ++K+K I I G  D + P+K+++F NR  + F DA+ ++  QE++L  + +G +EY  +   F SV ++TL+FP NFG D T+I+YIGL+GE ++     +    YE R N +  K  +
Sbjct:   71 DADEELLFNIPFTGNIKLKGIIICGANDDSHPNKVKIFKNRPKMTFDDAK-VKVDQEFELTRDPRGEIEYSPKVVNFSSVHHLTLYFPSNFGDDKTRIYYIGLRGEFSEAHYHGVTICNYEARANAADHKDKV 202          

HSP 2 Score: 34.2686 bits (77), Expect = 3.925e-26
Identity = 15/36 (41.67%), Postives = 22/36 (61.11%), Query Frame = 1
Query:   31 DWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQQSE 138
            ++SLY  ID   +  LNE   GS K+VFK +E + +
Sbjct:   28 EYSLYTKIDAENLECLNEETEGSGKTVFKPYESRQD 63          
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Match: U424_DROME (UPF0424 protein CG6153 OS=Drosophila melanogaster GN=CG6153 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.127e-25
Identity = 52/131 (39.69%), Postives = 79/131 (60.31%), Query Frame = 2
Query:  167 DGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVMATIGYELRPNPSTTKQ 559
            D D ELL  IPFT ++K+K I I G  D + P+ +++F NR  + F DA+  +  QE+ L  + +G +EY  +   F SV +++L+FP NFG D T+I+YIGL+GE T+     +    YE R N +  K+
Sbjct:   71 DADEELLFNIPFTGNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDAR-AKPDQEFQLTRDARGEIEYSPKVVTFSSVHHLSLYFPSNFGEDITRIYYIGLRGEFTEAHYHGVTICNYESRANAADHKE 200          

HSP 2 Score: 37.3502 bits (85), Expect = 1.127e-25
Identity = 17/36 (47.22%), Postives = 23/36 (63.89%), Query Frame = 1
Query:   31 DWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQQSE 138
            ++SLY  IDL  V  LNE   G  KSVFK +E++ +
Sbjct:   28 EYSLYTKIDLDNVECLNEETDGQGKSVFKPYEKRQD 63          
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Match: YOJ9_CAEEL (UPF0424 protein ZK353.9 OS=Caenorhabditis elegans GN=ZK353.9 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.510e-24
Identity = 52/123 (42.28%), Postives = 79/123 (64.23%), Query Frame = 2
Query:  167 DGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVMATIGYELR 535
            D D ELL  IPFT  V++  +SI+G  DG+ P+K+R+F +RE + F D   ++A QE DL ++ QG+++Y  + SKF ++ N+++    NFG D T+I+YIGL+GE     R  +A   YE R
Sbjct:   68 DCDHELLFNIPFTGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDDCS-IEADQEIDLKQDPQGLVDYPLKASKFGNIHNLSILVDANFGEDETKIYYIGLRGEFQHEFRQRIAIATYESR 189          

HSP 2 Score: 34.6538 bits (78), Expect = 4.510e-24
Identity = 14/35 (40.00%), Postives = 24/35 (68.57%), Query Frame = 1
Query:   34 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQQSE 138
            + +  +ID+ KV+ LNE+V G+ K VFK  E++ +
Sbjct:   26 YDMVSYIDMEKVTTLNESVDGAGKKVFKVMEKRDD 60          
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Match: CA128_DANRE (UPF0424 protein C1orf128 homolog OS=Danio rerio GN=zgc:77241 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.190e-23
Identity = 48/130 (36.92%), Postives = 76/130 (58.46%), Query Frame = 2
Query:  167 DGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVMATIGYELRPNPSTTK 556
            D D ELL  IPFT  VK+K I I G  D + P+++R+F N   + F D    +  Q + L  + +  LEY T+ ++F +V ++++H   NFG ++T+++YIGL+GE T+  R  +    YE   NP+  K
Sbjct:   70 DADEELLFNIPFTGSVKLKGIIISGEDDESHPAEIRLFKNIPQMSFDDTS-REPEQAFRLNRDPRAELEYPTKIARFSNVEHLSIHVSRNFGAESTRVYYIGLRGEYTEAHRHEVTICNYEAAANPADHK 198          

HSP 2 Score: 38.891 bits (89), Expect = 2.190e-23
Identity = 15/36 (41.67%), Postives = 25/36 (69.44%), Query Frame = 1
Query:   31 DWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQQSE 138
            ++ LY+ ID+ K+  LNE+  G  K VFK W+Q+++
Sbjct:   27 EYELYRRIDIEKLQCLNESRDGDGKLVFKPWDQRTD 62          
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Match: YN82_SCHPO (UPF0424 protein P35G2.02 OS=Schizosaccharomyces pombe GN=SPBP35G2.02 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.411e-16
Identity = 43/130 (33.08%), Postives = 67/130 (51.54%), Query Frame = 2
Query:  167 DGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQG--VLEYQTRYSKFQSVANITLHFPDNFGG-DTTQIHYIGLKGEATQLKRDVMATIGYELRPNPS 547
            D D +LL  +PF     +KSI +    + T+P    +F NR  +DF    D+QA + ++     +G  + E+  +   +Q++ N+ + F  + G  D TQI YIGL+G     K D + TI YE  P PS
Sbjct:   64 DADDQLLFQVPFAGAATLKSILVRIFPNETAPHSFSLFPNRTDLDFDTIGDVQATETFEFPLTFEGSHIFEFPVKTRLYQNLQNLNIFFTKSDGSDDPTQIAYIGLRGSFVPFKGDPVVTI-YEATPRPS 192          

HSP 2 Score: 33.8834 bits (76), Expect = 3.411e-16
Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 1
Query:    7 CEDHDCSS--DWSLYKHIDLSKVSALNEAVPGSVKSVFKAWE 126
            C++H   S  + +LY  I    +  LNEAVP S K VFK W+
Sbjct:   11 CDEHPFESGPNDTLYSCIRKESIVTLNEAVPDSGKLVFKPWD 52          
The following BLAST results are available for this feature:
BLAST of BQ623711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
U424_DICDI7.305e-3241.98UPF0424 protein OS=Dictyostelium discoideum GN=DDB... [more]
CA128_HUMAN2.809e-2742.52UPF0424 protein C1orf128 OS=Homo sapiens GN=C1orf1... [more]
CA128_MOUSE4.760e-2741.73UPF0424 protein C1orf128 homolog OS=Mus musculus G... [more]
CA128_XENLA3.016e-2638.64UPF0424 protein C1orf128 homolog OS=Xenopus laevis... [more]
U424_DROPS3.925e-2639.85UPF0424 protein GA19395 OS=Drosophila pseudoobscur... [more]
U424_DROME1.127e-2539.69UPF0424 protein CG6153 OS=Drosophila melanogaster ... [more]
YOJ9_CAEEL4.510e-2442.28UPF0424 protein ZK353.9 OS=Caenorhabditis elegans ... [more]
CA128_DANRE2.190e-2336.92UPF0424 protein C1orf128 homolog OS=Danio rerio GN... [more]
YN82_SCHPO3.411e-1633.08UPF0424 protein P35G2.02 OS=Schizosaccharomyces po... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00802 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00802 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623711 ID=BQ623711; Name=BQ623711; organism=Citrus sinensis; type=EST; length=565bp
CATAGCTGTGAAGATCACGATTGCTCTTCTGATTGGTCTCTCTACAAACA
TATAGATCTTTCCAAGGTGTCTGCATTAAATGAGGCTGTTCCAGGGAGTG
TCAAGTCAGTTTTCAAAGCATGGGAGCAGCAGTCTGAATTCTTCTGGGGA
ACATTTGGAAAGCAATGATGGTGATCCAGAGTTACTTGTTTATATTCCAT
TTACTACAGATGTTAAGATCAAGAGCATTTCAATTGTTGGTGGTGCTGAT
GGAACAAGTCCTTCGAAGATGAGAGTGTTCATCAATCGAGAGGGTATTGA
CTTCTCAGATGCTCAAGATATGCAAGCTATTCAGGAATGGGATTTGGTTG
AGAATTTGCAAGGAGTGTTAGAATACCAAACAAGGTATTCCAAATTTCAA
AGTGTGGCCAATATCACATTACACTTCCCTGACAATTTTGGTGGTGACAC
AACTCAGATACACTACATTGGCCTAAAAGGGGAAGCCACCCAGTTGAAGA
GGGACGTCATGGCAACAATTGGTTATGAGCTGAGGCCGAATCCCTCCACC
ACAAAACAAAGTCTG
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