BQ623712

Overview
NameBQ623712
Unique NameBQ623712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10835 contig Csv1_Contig10835:1001..1636. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623712 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.397e-74
Identity = 117/163 (71.78%), Postives = 137/163 (84.05%), Query Frame = 2
Query:   89 KPDLIAPGVNILAGWTGAVGPTGLENDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIRSALMTTAYSTYGNGKTLLDISTGQPSTPFDFGAGHVDPVAALDPGLVYDATVQDYLDFLCALDYSSFEIKQATNRDFACLSSKTYSLGDVNYPSFSV 577
            KPDLIAPGVNILA WTGA GPTGL +D R V FNIISGTSMSCPHVSGLAALLK+ HPEWSP+AIRSALMTTAY TY +GK LLDI+TG+PSTPFD GAGHV P  A +PGL+YD T +DYL FLCAL+Y+S +I+  + R++ C  SK+YS+ D+NYPSF+V
Sbjct:  503 KPDLIAPGVNILAAWTGAAGPTGLASDSRRVEFNIISGTSMSCPHVSGLAALLKSVHPEWSPAAIRSALMTTAYKTYKDGKPLLDIATGKPSTPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTSPQIRSVSRRNYTCDPSKSYSVADLNYPSFAV 665          

HSP 2 Score: 49.2914 bits (116), Expect = 1.397e-74
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 1
Query:    4 GTQLGIQPSPVVAAFSSRGPNPITPEILQ 90
            GT +G++PSPVVAAFSSRGPN ITP IL+
Sbjct:  475 GTVVGVKPSPVVAAFSSRGPNSITPNILK 503          
BLAST of BQ623712 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.348e-36
Identity = 75/163 (46.01%), Postives = 100/163 (61.35%), Query Frame = 2
Query:   89 KPDLIAPGVNILAGWTGAVGPTGLENDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIRSALMTTAYSTYGNGKTLLDISTGQPSTPFDFGAGHVDPVAALDPGLVYDATVQDYLDFLCALDYSSFEIKQATNRDFACLSSKTYSLGDVNYPSFSV 577
            KPD+  PGV ILA W  +V P G    +R+  FNIISGTSMSCPH++G+A  +K  +P WSP+AI+SALMTTA                 P   F +G+GHV+P+ A+ PGLVYDA   DY+ FLC   Y++  +++ T    AC S  T  + D+NYPSF +
Sbjct:  489 KPDISGPGVEILAAWP-SVAPVG--GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFN---------PQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGL 639          

HSP 2 Score: 29.261 bits (64), Expect = 2.348e-36
Identity = 11/21 (52.38%), Postives = 17/21 (80.95%), Query Frame = 1
Query:   28 SPVVAAFSSRGPNPITPEILQ 90
            +PVV +FSSRGPN  T ++++
Sbjct:  469 APVVVSFSSRGPNRATKDVIK 489          
BLAST of BQ623712 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.150e-29
Identity = 64/177 (36.16%), Postives = 95/177 (53.67%), Query Frame = 2
Query:   68 PSHQKYFKPDLIAPGVNILAGWTGAVGPTGLENDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIRSALMTTAYSTYGNGKTLLDISTGQPSTPFDFGAGHVDPVAALDPGLVYDATVQDYLDFLCALDYSSFEIKQATNRDFACLSSKTYSLG--DVNYPSFSVPFETA 592
            P   +  KPD+ APG++ILA +T     TGL+ D +   F I+SGTSM+CPHV+G+AA +K+ HP+W+P+AI+SA++T+A                     F +G G ++P  A  PGLVYD     Y+ FLC   Y++  +           SS    LG   +NYP+  +   +A
Sbjct:  490 PGSIRLLKPDIAAPGIDILAAFTLKRSLTGLDGDTQFSKFTILSGTSMACPHVAGVAAYVKSFHPDWTPAAIKSAIITSAKPI---------SRRVNKDAEFAYGGGQINPRRAASPGLVYDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTIQLTLRSA 657          

HSP 2 Score: 31.187 bits (69), Expect = 5.150e-29
Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1
Query:   25 PSPVVAAFSSRGPNPITPEILQ 90
            P+P VA+FSSRGPNP +  +L+
Sbjct:  476 PAPFVASFSSRGPNPGSIRLLK 497          
The following BLAST results are available for this feature:
BLAST of BQ623712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH1.397e-7471.78Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME2.348e-3646.01Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH5.150e-2936.16Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00803 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00803 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623712 ID=BQ623712; Name=BQ623712; organism=Citrus sinensis; type=EST; length=638bp
AGAGGCACTCAGTTGGGGATCCAACCATCACCGGTTGTGGCAGCATTCAG
CTCTAGAGGTCCAAATCCCATCACACCAGAAATACTTCAAACCAGATCTC
ATAGCACCAGGAGTCAATATCCTAGCTGGCTGGACTGGTGCAGTTGGTCC
AACTGGGTTAGAAAATGACAAAAGGCATGTAAGCTTCAATATCATTTCTG
GCACATCGATGTCATGTCCCCATGTAAGTGGGCTGGCTGCACTCCTCAAG
GCTGCTCACCCAGAATGGAGCCCCTCAGCCATTAGGTCTGCTCTCATGAC
TACAGCCTACTCAACATATGGCAATGGCAAAACCCTACTAGACATTTCCA
CTGGACAACCATCAACACCATTCGACTTTGGCGCTGGACATGTAGATCCT
GTAGCAGCTCTTGATCCTGGCCTTGTCTATGATGCCACTGTCCAAGACTA
CCTAGACTTCCTCTGTGCCTTAGACTATAGCTCGTTTGAGATTAAGCAAG
CTACAAACAGAGACTTCGCCTGCCTGTCAAGCAAAACATACAGCCTGGGT
GATGTTAATTACCCATCTTTCTCTGTTCCATTTGAAACAGCATCAGGTAC
ATGGGGTGGGTGTTGGCGCCCCAAGCACTGGGAAATAC
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