BQ623717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFC5_MOUSE (Replication factor C subunit 5 OS=Mus musculus GN=Rfc5 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.166e-64 Identity = 125/205 (60.98%), Postives = 157/205 (76.59%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREV 616 + +M+LELNASDDRGID+VR I FAST++ K KLV+LDEADAMT+DAQ ALRRVIEK+T+NTRF LICN ++KIIPALQSRCTRFRF PL P + RL+HV++ E +D++E G+ ALV L +GDMR+ALNILQST+MA ++TEE VY CTG+PL DI I W+LN+ F ++K I E+ KGLAL DI+ EV Sbjct: 82 FGSMVLELNASDDRGIDIVRGPILSFASTRTI---FKKGFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKTDIANILDWMLNQDFTTAYKNIMELKTLKGLALHDILTEV 283
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFC5_HUMAN (Replication factor C subunit 5 OS=Homo sapiens GN=RFC5 PE=1 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.135e-64 Identity = 123/205 (60.00%), Postives = 158/205 (77.07%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREV 616 + +M+LELNASDDRGID++R I FAST++ K KLV+LDEADAMT+DAQ ALRRVIEK+T+NTRF LICN ++KIIPALQSRCTRFRF PL P + RL+HV+E E +D++E G+ ALV L +GDMR+ALNILQST+MA ++TEE VY CTG+PL DI I W+LN+ F +++ I+E+ KGLAL DI+ E+ Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTI---FKKGFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLALHDILTEI 284
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFC5_DICDI (Probable replication factor C subunit 5 OS=Dictyostelium discoideum GN=rfc5 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 5.783e-58 Identity = 118/204 (57.84%), Postives = 146/204 (71.57%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIV 607 Y M+LELNASDDRGIDVVR+QI+ FAS+ F F KL++LDEAD+MT AQ ALRRVIEKYTK TRF ++CN V KIIPALQSRCTRFRF+PL RLK +IE E + V + A++ L GDMRK LNILQS M+S ITEEA+Y CTG P+P DIE + WLLN + ++F+ IS++ +KGL+L DI+ Sbjct: 86 YSRMVLELNASDDRGIDVVREQIKTFASSMFF-FNTTVPYKLIILDEADSMTNIAQTALRRVIEKYTKTTRFCIVCNYVIKIIPALQSRCTRFRFSPLPTPPTEIRLKEIIEKENVKVDSKAMNAVLELGCGDMRKCLNILQSVSMSSIDNNITEEAIYKCTGYPMPSDIELMVDWLLNSDYEEAFQNISDLKKKKGLSLNDII 288
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFC3_SCHPO (Replication factor C subunit 3 OS=Schizosaccharomyces pombe GN=rfc3 PE=1 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 1.741e-54 Identity = 107/202 (52.97%), Postives = 141/202 (69.80%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIV 607 Y N ++ELNASDDRGID VR+QI++FAST+ ++ K+++LDEADAMT AQ ALRRVIEKYTKN RF +ICN +NKI PA+QSRCTRFRF PL P + + + HVI++E ++ A++RL GDMRKALNILQ+ H A I A+Y C G+P P DI+ ++N+ F +F IS + +KGLAL DI+ Sbjct: 85 YRNQLMELNASDDRGIDAVREQIKNFASTRQI---FASTFKMIILDEADAMTLAAQNALRRVIEKYTKNVRFCIICNYINKISPAIQSRCTRFRFQPLPPKEIEKTVDHVIQSEHCNIDPDAKMAVLRLSKGDMRKALNILQACHAAYDHIDVSAIYNCVGHPHPSDIDYFLKSIMNDEFVIAFNTISSIKQQKGLALQDIL 283
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFC3_ARXAD (Replication factor C subunit 3 OS=Arxula adeninivorans GN=RFC3 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.203e-49 Identity = 108/206 (52.43%), Postives = 142/206 (68.93%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFAST-QSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHM---ASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIV 607 Y NMILELNASD+RGIDVVR QI+ FAST Q FS G K LV+LDEADAMT AQ ALRR+IEKY+ +TRF ++ N +K+ PAL SRCTRFRF+PL+ + RL HVIE E +D++ +L+ L +GDMR+ALN+LQ+ + A +QI+EE VY C G+P P DI + +L+ S+ + S + KGLAL D++ Sbjct: 79 YRNMILELNASDERGIDVVRDQIKTFASTRQIFSSGFK----LVILDEADAMTNAAQNALRRIIEKYSAHTRFCILANYTHKLNPALLSRCTRFRFSPLKEDAIKHRLAHVIEQESVDLSPEAFQSLLHLSSGDMRRALNVLQACYASVDAGEQISEELVYDCVGSPRPADIRTVLQAVLDGSWESALHTFSYIKQSKGLALADML 280
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFC5_CAEEL (Probable replication factor C subunit 5 OS=Caenorhabditis elegans GN=F44B9.8 PE=1 SV=3) HSP 1 Score: 193.356 bits (490), Expect = 8.370e-49 Identity = 103/206 (50.00%), Postives = 134/206 (65.05%), Query Frame = 2 Query: 8 NMILELNASDDRGIDVVRQQIQDFAST---QSFSFGVKASV---KLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIV 607 +M+LELNASD+RGIDVVR I +FA T Q+FS KLV+LDEADAMTKDAQ ALRRVIEKYT N RF +ICN + I+PA+QSRCTRFRFAPL+ + RL++++E E L +T G AL+ + GDMR +N LQST M+ ++E VY C G P PK+++++ LLN+ I G AL D++ Sbjct: 94 SMVLELNASDERGIDVVRNTIVNFAQTKGLQAFSTSSNTGTVPFKLVILDEADAMTKDAQNALRRVIEKYTDNVRFCIICNYLASIVPAIQSRCTRFRFAPLDQKLIVPRLEYIVETEQLKMTPDGKDALLIVSKGDMRTVINTLQSTAMSFDTVSENTVYQCIGQPTPKEMKEVVKTLLNDPSKKCMNTIQTKLFENGYALQDVI 299
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFC3_YEAST (Replication factor C subunit 3 OS=Saccharomyces cerevisiae GN=RFC3 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.209e-47 Identity = 101/214 (47.20%), Postives = 140/214 (65.42%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFAST-QSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMA-----SQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREVTMV 625 Y NM+LELNASDDRGIDVVR QI+DFAST Q FS G K L++LDEADAMT AQ ALRRVIE+YTKNTRF ++ N +K+ PAL SRCTRFRF PL + R+ +V+ E L ++ AL+ L NGDMR+ LN+LQS +I+++ +Y C G P P D++ + +L + + + ++++ KGLAL+D++ + + Sbjct: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK----LIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKI 284
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_PYRHO (Replication factor C small subunit OS=Pyrococcus horikoshii GN=rfcS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.406e-42 Identity = 86/201 (42.79%), Postives = 137/201 (68.16%), Query Frame = 2 Query: 5 HNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIV 607 HN LELNASD+RGI+V+R+++++FA T+ AS K++ LDEADA+T+DAQ ALRR +E ++ N RF L CN +KII +QSRC FRF PL + +RL+++ E EGL++TE GL A++ + GDMR+A+NILQ+ ++IT+E V++ P+DI ++ L +F + +++ E+ +++GL+ D++ Sbjct: 604 HNF-LELNASDERGINVIREKVKEFARTKPIG---GASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVL 800
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_PYRFU (Replication factor C small subunit OS=Pyrococcus furiosus GN=rfcS PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.406e-42 Identity = 86/201 (42.79%), Postives = 137/201 (68.16%), Query Frame = 2 Query: 5 HNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIV 607 HN LELNASD+RGI+V+R+++++FA T+ AS K++ LDEADA+T+DAQ ALRR +E ++ N RF L CN +KII +QSRC FRF PL + +RL+++ E EGL++TE GL A++ + GDMR+A+NILQ+ ++IT+E V++ P+DI ++ L +F + +++ E+ +++GL+ D++ Sbjct: 602 HNF-LELNASDERGINVIREKVKEFARTKPIG---GASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVL 798
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_UNCMA (Replication factor C small subunit OS=Uncultured methanogenic archaeon RC-I GN=rfcS PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 85/205 (41.46%), Postives = 126/205 (61.46%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREV 616 +H+ +ELNASD+RGIDVVR I++FA T +A K++ LDEADA+T DAQ ALRR +E+Y RF + CN +KII +QSRC +RF PL +T + + + EGL + + G+ AL+ + GDMR+A+N LQS ++ IT + +Y T PK+IE + LN F DS ++ E+ + GL+ DI+ ++ Sbjct: 67 WHSNFIELNASDERGIDVVRNNIKNFARTAPLG---EAKFKIIFLDEADALTSDAQSALRRTMERYAATCRFIISCNYSSKIIEPIQSRCAVYRFGPLNATDITTGITRIAKNEGLKIEKDGMDALIYVARGDMRRAINALQSAATIAKDITADVIYQTTSTAKPKEIEDMLKLALNGQFMDSRNKLDELLITYGLSGTDIIDQI 268 The following BLAST results are available for this feature:
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623717 ID=BQ623717; Name=BQ623717; organism=Citrus sinensis; type=EST; length=632bpback to top |