BQ623732

Overview
NameBQ623732
Unique NameBQ623732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length477
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11744 contig Csv1_Contig11744:758..1234. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623732 vs. ExPASy Swiss-Prot
Match: EIN2_ARATH (Ethylene-insensitive protein 2 OS=Arabidopsis thaliana GN=EIN2 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 2.731e-70
Identity = 128/160 (80.00%), Postives = 142/160 (88.75%), Query Frame = 1 
Query:    1 WKVDLILSFGVWCIHRILNLSLMESRPELWGKYTYVLNRLQGVIDLAFSRPRSPMSACFCLQIPAVHQKSSPPLSNGMLPPAVKPAKGKCTTAAMLLDLIKDVENAISCRKGRTGTAAGDVAFPKGKENLASVLKRYRRRLSNKPAGTHEVS-GPRKVLT 477
            W+ DLI+SFGVWCIHR+L+LSLMESRPELWGKYTYVLNRLQGVID AFS+ R+PM+ CFCLQIPA HQ++SP  +NGMLPPA KPAKGKCTTA  LLDLIKDVE AISCRKGRTGTAAGDVAFPKGKENLASVLKRY+RRLSNKP G ++   G RK +T
Sbjct: 1129 WRADLIVSFGVWCIHRVLDLSLMESRPELWGKYTYVLNRLQGVIDPAFSKLRTPMTPCFCLQIPASHQRASPTSANGMLPPAAKPAKGKCTTAVTLLDLIKDVEMAISCRKGRTGTAAGDVAFPKGKENLASVLKRYKRRLSNKPVGMNQDGPGSRKNVT 1288
The following BLAST results are available for this feature:
BLAST of BQ623732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EIN2_ARATH2.731e-7080.00Ethylene-insensitive protein 2 OS=Arabidopsis thal... [more]
back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00823 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00823 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623732 ID=BQ623732; Name=BQ623732; organism=Citrus sinensis; type=EST; length=477bp
TGGAAAGTGGACTTGATATTAAGCTTCGGAGTATGGTGCATTCACCGGAT
TCTTAATCTTTCCCTCATGGAGAGCCGGCCTGAACTGTGGGGAAAATATA
CTTACGTATTGAATCGTCTTCAGGGTGTCATAGATTTGGCATTTTCAAGA
CCTCGTTCTCCAATGTCAGCATGCTTTTGCCTTCAAATCCCTGCAGTGCA
TCAGAAGTCAAGCCCTCCTCTTTCAAATGGCATGTTGCCTCCTGCTGTGA
AACCAGCAAAAGGGAAATGCACAACTGCAGCAATGCTCCTAGACCTTATC
AAGGACGTGGAAAATGCAATATCTTGTCGGAAGGGTCGAACAGGCACTGC
TGCTGGGGATGTGGCCTTTCCCAAAGGGAAAGAGAATTTGGCATCTGTTC
TCAAACGGTACAGACGTCGATTATCCAACAAGCCAGCTGGCACTCACGAG
GTTTCTGGGCCACGGAAGGTACTGACC
back to top