BQ623737

Overview
NameBQ623737
Unique NameBQ623737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:75..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.028e-61
Identity = 115/179 (64.25%), Postives = 135/179 (75.42%), Query Frame = 2
Query:   62 LREGASNTSLVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIL 595
            L+E   +  LVPV+M+AG+HKKE F++LNPFGQVP  E GD KLFESRAITQYIA  + DKG QL     K +A + VW EVE+ +FDP +SKL +E+V KPM GM TD AAV ENE KL K+LDVYE+RL  SKYL  DSFTL DLHH P +N L+GT VK LFD+RPHVSAW ADIL
Sbjct:   21 LKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADIL 199          

HSP 2 Score: 28.1054 bits (61), Expect = 3.028e-61
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 3
Query:    3 GIKVHGSVFSTATQRVFASLYEKE 74
            G+K+HG   S A  RV A+L EK+
Sbjct:    2 GMKLHGPAMSPAVMRVIATLKEKD 25          
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.310e-60
Identity = 106/169 (62.72%), Postives = 131/169 (77.51%), Query Frame = 2
Query:   92 VPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIL 595
            VPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL     K +  + VW EVE  +F+PP++KL WEL  KP+ GMTTD AAV+E+EA+L+K+LD+YE +L++SKYL  DSFTLVDLHH+PNI  L+ + VK++FD+RP VSAW ADIL
Sbjct:   31 VPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADIL 199          

HSP 2 Score: 33.4982 bits (75), Expect = 7.310e-60
Identity = 17/23 (73.91%), Postives = 17/23 (73.91%), Query Frame = 3
Query:    6 IKVHGSVFSTATQRVFASLYEKE 74
            IKVHGS  STAT RV A L EKE
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKE 25          
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 2.113e-59
Identity = 112/179 (62.57%), Postives = 129/179 (72.07%), Query Frame = 2
Query:   56 IPLREGASNTSLVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 592
            I L E   +   V V++K GEHKKE F+  NPFG+VP  E GD K+FESRAITQYIA EF DKG  L   GK +A + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADI
Sbjct:   20 IALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADI 198          

HSP 2 Score: 28.8758 bits (63), Expect = 2.113e-59
Identity = 14/23 (60.87%), Postives = 17/23 (73.91%), Query Frame = 3
Query:    3 GIKVHGSVFSTATQRVFASLYEK 71
            GIKV G   STAT+RV  +L+EK
Sbjct:    3 GIKVFGHPASTATRRVLIALHEK 25          
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 3.591e-59
Identity = 107/170 (62.94%), Postives = 129/170 (75.88%), Query Frame = 2
Query:   89 LVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLL-VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIL 595
            LVPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL        P++ VW EVE  +F+P +SKL WEL  KP+ GMTTD  AV+E+E +L+K+LD+YE RL++SKYL  DSFTLVDLHH+PNI  L+ T VK++FD+RP VSAW ADIL
Sbjct:   30 LVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADIL 199          

HSP 2 Score: 32.3426 bits (72), Expect = 3.591e-59
Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = 3
Query:    6 IKVHGSVFSTATQRVFASLYEKE 74
            IKVHGS  STAT RV A L EK+
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKD 25          
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 6.647e-58
Identity = 112/180 (62.22%), Postives = 129/180 (71.67%), Query Frame = 2
Query:   56 IPLREGASNTSLVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 592
            I L E   +   V +++K GEHKKE F+  NPFG+VP  E GD KLFESRAITQYIA  + DKG QL   G K IA + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADI
Sbjct:   20 IALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADI 199          

HSP 2 Score: 28.8758 bits (63), Expect = 6.647e-58
Identity = 14/23 (60.87%), Postives = 17/23 (73.91%), Query Frame = 3
Query:    3 GIKVHGSVFSTATQRVFASLYEK 71
            GIKV G   STAT+RV  +L+EK
Sbjct:    3 GIKVFGHPASTATRRVLIALHEK 25          
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 3.255e-57
Identity = 107/170 (62.94%), Postives = 129/170 (75.88%), Query Frame = 2
Query:   89 LVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 592
            L+PVDM+AG HK+EA L+LNPFGQ+P LE GD  LFESRAITQY+A+E+ +KG +L      K  A   VW +VE  QFDP +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVYEARL++S++LA DSFTL DLHHLP I+ LLGT  K LFD+RP VS W   I
Sbjct:   79 LIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKI 248          

HSP 2 Score: 34.6538 bits (78), Expect = 3.255e-57
Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 3
Query:    6 IKVHGSVFSTATQRVFASLYEKE 74
            IKVHG   STAT RV A+LYEK+
Sbjct:   52 IKVHGVPMSTATMRVLATLYEKD 74          
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 3.263e-57
Identity = 112/184 (60.87%), Postives = 136/184 (73.91%), Query Frame = 2
Query:   56 IPLREGASNTSLVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIA--QEFPDKGTQLTCPGK-PIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYL-ACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIL 595
            + L E       VP+DM AG HK+ ++L+LNPFGQVP LE G+ KLFESRAIT+Y+A   +  ++GT L    K  +A  LVW+EVEA QFDP +SKL WELV+K +FGM TD   VEENEAKLAK+LDVYEARL++S+YL A DSFTLVDLHHLP +  L+GT VKKLF+ R HVSAW   IL
Sbjct:   19 VALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHVSAWCKKIL 202          

HSP 2 Score: 34.2686 bits (77), Expect = 3.263e-57
Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 3
Query:    6 IKVHGSVFSTATQRVFASLYEK 71
            IKVHG+  STATQRV  +LYEK
Sbjct:    3 IKVHGNPRSTATQRVLVALYEK 24          
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.720e-52
Identity = 107/183 (58.47%), Postives = 126/183 (68.85%), Query Frame = 2
Query:   56 IPLREGASNTSLVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLT-CPGKPIAPLLVWK---EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 592
            I L E   +  LV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT L     K IA   +     +VEA QFDP +SKL WE V+K  +G+ TD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+I
Sbjct:   20 IALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRVNEWVAEI 202          

HSP 2 Score: 27.7202 bits (60), Expect = 1.720e-52
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 3
Query:    3 GIKVHGSVFSTATQRVFASLYEK 71
            GIKV G   ST+T+RV  +L+EK
Sbjct:    3 GIKVFGHPASTSTRRVLIALHEK 25          
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 2.436e-51
Identity = 105/183 (57.38%), Postives = 128/183 (69.95%), Query Frame = 2
Query:   56 IPLREGASNTSLVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLT-CPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 592
            I L E   +  LV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT L     K I   A + +  +VE  QFDP +SKL +E ++K ++G+TTD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+I
Sbjct:   20 IALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEI 202          

HSP 2 Score: 26.5646 bits (57), Expect = 2.436e-51
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 3
Query:    3 GIKVHGSVFSTATQRVFASLYEK 71
            GIKV G   S AT+RV  +L+EK
Sbjct:    3 GIKVFGHPASIATRRVLIALHEK 25          
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 150.214 bits (378), Expect = 7.493e-36
Identity = 81/174 (46.55%), Postives = 108/174 (62.07%), Query Frame = 2
Query:   62 LREGASNTSLVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK-LFDARPHVSAW 580
            L E   +  +VPVD+  G HK+  FL+LNPFGQ+P L  GD+ LFESRAI +YIA ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H     L    P +     ARPHV AW
Sbjct:   22 LNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAW 195          
The following BLAST results are available for this feature:
BLAST of BQ623737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
GSTF_HYOMU3.028e-6164.25Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF1_TOBAC7.310e-6062.72Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF1_ARATH2.113e-5962.57Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF2_TOBAC3.591e-5962.94Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GST11_ARATH6.647e-5862.22Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF6_ARATH3.255e-5762.94Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF_SILCU3.263e-5760.87Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GST16_ARATH1.720e-5258.47Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH2.436e-5157.38Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF3_MAIZE7.493e-3646.55Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00828 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00828 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623737 ID=BQ623737; Name=BQ623737; organism=Citrus sinensis; type=EST; length=605bp
CAGGCATCAAGGTCCACGGTTCTGTTTTCTCAACTGCTACGCAGCGAGTT
TTCGCATCCCTCTACGAGAAGGAGCCTCGAATACGAGCCTTGTCCCCGTA
GACATGAAGGCTGGTGAACACAAAAAGGAGGCCTTCCTTTCTTTGAATCC
ATTCGGTCAAGTTCCGGTGCTTGAACACGGCGACCAGAAGCTCTTCGAAT
CAAGGGCAATCACCCAATACATCGCCCAGGAGTTTCCAGACAAAGGCACC
CAGTTAACATGCCCAGGCAAGCCCATCGCCCCGTTATTGGTATGGAAGGA
GGTGGAGGCACTCCAGTTCGACCCCCCATCATCGAAGCTCAACTGGGAGC
TCGTGTACAAGCCAATGTTTGGAATGACCACTGATCCAGCTGCGGTTGAA
GAAAATGAAGCTAAGCTTGCCAAAATTTTAGATGTTTACGAGGCCCGTTT
GTCTCAGTCCAAATACTTGGCGTGCGACAGCTTCACCTTGGTCGATTTGC
ATCATCTCCCCAATATTAATTTGTTGTTGGGGACGCCTGTCAAGAAGCTG
TTTGATGCACGCCCCCATGTTAGCGCATGGGCAGCTGATATACTTCCAGA
CCGGC
back to top