BQ623742

Overview
NameBQ623742
Unique NameBQ623742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4610 contig Csv1_Contig4610:676..1193. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 1.872e-49
Identity = 91/104 (87.50%), Postives = 98/104 (94.23%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSSNI 312
            TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARS GAAVIYNK K WDD WIFWVGPFIGAAIAAFYHQF+LRAS SK+LGSF+S++N+
Sbjct:  182 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAANV 285          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.115e-49
Identity = 90/104 (86.54%), Postives = 98/104 (94.23%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSSNI 312
            TVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARS GAAVIYNK K WDD WIFWVGPFIGAAIAAFYHQF+LRAS SK+LGSF+S++N+
Sbjct:  184 TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAANV 287          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.585e-48
Identity = 89/104 (85.58%), Postives = 97/104 (93.27%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSSNI 312
            TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARS GAAVI+NK K WDD WIFWVGPFIGA IAAFYHQF+LRAS SK+LGSF+S++N+
Sbjct:  182 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLGSFRSAANV 285          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 7.867e-48
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 306
            TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI VTGTGINPARSLGAAVIYNK+K WDD WIFWVGP +GAAIAAFYHQ+ILRA A KALGSF+S++
Sbjct:  189 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALGSFRSNA 290          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.342e-47
Identity = 89/102 (87.25%), Postives = 96/102 (94.12%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 306
            TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI VTGTGINPARSLGAAV+YNK+K WDD WIFWVGP +GAAIAAFYHQ+ILRA A KALGSF+S++
Sbjct:  191 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALGSFRSNA 292          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.753e-47
Identity = 91/100 (91.00%), Postives = 93/100 (93.00%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKS 300
            TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARS GAAVIYN EKAWDDQWIFWVGP IGAA AAFYHQFILRA+A KALGSF S
Sbjct:  184 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALGSFGS 283          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.660e-47
Identity = 87/104 (83.65%), Postives = 96/104 (92.31%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSSNI 312
            TVFSATDPKR+ARDSHVPVLAPLPIGFAVF+VHLATI +TGTGINPARSLGAA+IYNK+KAWD  WIFWVGPF GAAIAAFYHQF+LRA A KALGSF+S  ++
Sbjct:  183 TVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALGSFRSQPHV 286          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.698e-47
Identity = 86/100 (86.00%), Postives = 93/100 (93.00%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKS 300
            TVFSATDPKRNARDSH+PVLAPLPIGF+VFMVHLATI +TGTGINPARS GAAVIYN +KAWDDQWIFWVGPF+GAAIAAFYHQF+LRA A KA GS +S
Sbjct:  183 TVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKAYGSVRS 282          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.136e-46
Identity = 87/102 (85.29%), Postives = 96/102 (94.12%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 306
            TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARS+GAAVI+N EKAW + WIFWVGPF+GAAIAAFYHQ+ILRA A KALGSF+S++
Sbjct:  189 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSNA 290          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.938e-46
Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 306
            TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI VTGTGINPARS G AVI+N +KAWDDQWI+WVGPF+GAA+AA YHQ+ILR SA KALGSF+S++
Sbjct:  186 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKALGSFRSNA 287          
The following BLAST results are available for this feature:
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PIP22_ARATH1.872e-4987.50Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP21_ARATH7.115e-4986.54Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP23_ARATH1.585e-4885.58Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP21_MAIZE7.867e-4888.24Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP22_MAIZE1.342e-4787.25Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP24_ARATH1.753e-4791.00Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP25_ARATH6.660e-4783.65Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP26_ARATH8.698e-4786.00Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP21_ORYSJ1.136e-4685.29Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP27_MAIZE1.938e-4684.31Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00833 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00833 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623742 ID=BQ623742; Name=BQ623742; organism=Citrus sinensis; type=EST; length=518bp
ACTGTTTTCTCCGCCACTGATCCCAAGAGAAATGCTAGGGACTCCCATGT
TCCTGTCTTGGCACCATTGCCAATTGGATTTGCTGTGTTCATGGTTCACT
TGGCTACGATCTCTGTCACTGGAACTGGCATCAACCCCGCTAGAAGTTTG
GGAGCTGCGGTGATTTACAACAAGGAGAAGGCTTGGGATGATCAATGGAT
CTTCTGGGTTGGCCCCTTCATTGGTGCTGCAATTGCTGCATTTTACCACC
AATTCATCCTCAGAGCATCTGCTTCTAAAGCTCTTGGATCCTTCAAAAGC
TCCTCCAACATTTAATTAACTTTTAAAATAATTACTGGAGGATTAATCAA
TGGCTGTCAAGCGGCTTCGTGACTATGGAATTTGTACATTGTTTTATTTG
CATCAGTATTTAGTAGAGCTGGTGTAGATCCCGCAGCACTTTGTGTGTGT
CTTTTGTTTACCTGAGGACACTCGTTTTTAGTGTGCCCCAAAAATTATTA
TTTGCTTTGCATTCCTTC
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