BQ623753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623753 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.370e-44 Identity = 88/104 (84.62%), Postives = 94/104 (90.38%), Query Frame = 3 Query: 51 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 362 E ARQI+G+R +QS T RK SFVVRAASTPPVKQGA+R LWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYGEVINGR+AMLGA GAIAP Sbjct: 17 EAARQIIGSRISQSVT---RKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117
BLAST of BQ623753 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 9.818e-43 Identity = 87/105 (82.86%), Postives = 91/105 (86.67%), Query Frame = 3 Query: 51 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGA-DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 362 E RQ ARS S G SRKG +VRAA+TPPVKQG DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLGAVGAIAP Sbjct: 17 EAVRQSFRARSLPSSVGCSRKG--LVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAP 119
BLAST of BQ623753 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.332e-14 Identity = 46/105 (43.81%), Postives = 56/105 (53.33%), Query Frame = 3 Query: 66 ILGARSAQSPTGSS-RKGSFVV----RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 362 I+GA A G R F+ R+ + V DRPLWF +LDGSLPGD+GFDPLGL SDPE KW A E+++ R+AMLGA G P Sbjct: 26 IVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIP 124
BLAST of BQ623753 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.753e-13 Identity = 39/79 (49.37%), Postives = 48/79 (60.76%), Query Frame = 3 Query: 129 RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 362 R+A+T V DRPLWF +LDGSLPGD+GFDPLGL SDPE +W E+++ R+AMLGA G P Sbjct: 52 RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQAELVHCRWAMLGAAGIFIP 124
BLAST of BQ623753 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.910e-11 Identity = 40/91 (43.96%), Postives = 47/91 (51.65%), Query Frame = 3 Query: 93 PTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 362 P G S SF V A K+G W S YL GSLPGD GFDPLGL+ DPE +W E++NGR+AMLG G + P Sbjct: 38 PVGCSPSASFKVEA------KKGE----WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENL------RWFVQAELVNGRWAMLGVAGMLLP 112 The following BLAST results are available for this feature:
BLAST of BQ623753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623753 ID=BQ623753; Name=BQ623753; organism=Citrus sinensis; type=EST; length=404bpback to top |