BQ623756

Overview
NameBQ623756
Unique NameBQ623756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9356 contig Csv1_Contig9356:199..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.374e-49
Identity = 91/115 (79.13%), Postives = 107/115 (93.04%), Query Frame = 2
Query:   65 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            M+SFK+++T ++RL ESREIIAKYP R+PVIAE+Y K DLP +EKKKFLVPRDMSVGQFI+ILS+RLHL+PGKALFVFV +TLPQTA LMDSVYES+KD+DGF+YMCYSSEKTFG
Sbjct:    1 MKSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.902e-44
Identity = 82/115 (71.30%), Postives = 101/115 (87.83%), Query Frame = 2
Query:   65 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            ++SFKD+F+ ++RL+ES  IIAKYPDR+PVI E+YS ADLPDMEK K+LVPRDM+VG FIH+LS R+ L P KALFVFV +TLPQTA+ MDS+Y +FK+EDGFLYMCYS+EKTFG
Sbjct:    5 VKSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 3.357e-41
Identity = 81/117 (69.23%), Postives = 100/117 (85.47%), Query Frame = 2
Query:   62 KMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDE-DGFLYMCYSSEKTFG 409
            K + FK+EFT E+R +ES  +IA YPDR+PVI E++S+++LP+MEK+K+LVP +M VGQFI IL SRLHL+PG ALFVFV +TLPQTA LM SVYES+KDE DGFLY+CYSSEKTFG
Sbjct:    2 KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.973e-33
Identity = 63/115 (54.78%), Postives = 87/115 (75.65%), Query Frame = 2
Query:   65 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            + SFK E   E+R  E+  I  KYPDR+PVI ER  K+D+PD+++KK+LVP D++VGQF++++  R+ L+P KA+F+FVK+ LP TA +M ++YE  KDEDGFLYM YS E TFG
Sbjct:    3 ISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.395e-33
Identity = 61/115 (53.04%), Postives = 88/115 (76.52%), Query Frame = 2
Query:   65 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            M SFK E  FE+R  E++ I +KYPDR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+P KA+F+F+ + LP TA LM ++YE  KD DGFLY+ YS E TFG
Sbjct:    1 MSSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.395e-33
Identity = 61/115 (53.04%), Postives = 88/115 (76.52%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFGYE 415
            SFK E+ FE+R  ES  I  K+ +R+PVI E+  K+D+P+++K+K+LVP D++VGQF++++  R+ L P KA+F+FV DTLP TA+LM  VY+  KD+DGFLY+ YS E TFGY+
Sbjct:    4 SFKSEYPFEKRKAESERISEKFQNRIPVICEKAEKSDIPEVDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTFGYQ 118          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.739e-33
Identity = 62/113 (54.87%), Postives = 87/113 (76.99%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            +FK EF FE+R  ES  I+ K+ +R+PVI ER  K+D+PD++K+K+LVP D++VGQF++++  R+ L   KA+F+FV DTLP TA LM S+Y+  KD+DGFLY+ YSSE TFG
Sbjct:    4 AFKSEFPFEKRKAESERIVQKFHNRIPVICERGGKSDIPDIDKRKYLVPGDLTVGQFVYVIRKRIKLPAEKAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 5.739e-33
Identity = 63/113 (55.75%), Postives = 87/113 (76.99%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            SFK + T E+R  E+  I  KY DR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+P KA+F+FVK+TLP TA LM ++YE  KDEDGFLYM YS E TFG
Sbjct:    5 SFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.739e-33
Identity = 63/113 (55.75%), Postives = 87/113 (76.99%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            SFK + T E+R  E+  I  KY DR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+P KA+F+FVK+TLP TA LM ++YE  KDEDGFLYM YS E TFG
Sbjct:    5 SFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.496e-33
Identity = 63/112 (56.25%), Postives = 85/112 (75.89%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            FKDE  FE+R  E+  I  KY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV+DTLP TA LM S+YE  KDEDGFLY+ YS E TFG
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYTDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ATG8I_ARATH4.374e-4979.13Autophagy-related protein 8i OS=Arabidopsis thalia... [more]
ATG8H_ARATH1.902e-4471.30Autophagy-related protein 8h OS=Arabidopsis thalia... [more]
ATG8D_ORYSJ3.357e-4169.23Autophagy-related protein 8D OS=Oryza sativa subsp... [more]
ATG8D_ARATH1.973e-3354.78Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8_PHYIN4.395e-3353.04Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8_CANGA4.395e-3353.04Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_KLULA5.739e-3354.87Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
ATG8B_ORYSJ5.739e-3355.75Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI5.739e-3355.75Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8_MAGGR7.496e-3356.25Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00847 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00847 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623756 ID=BQ623756; Name=BQ623756; organism=Citrus sinensis; type=EST; length=596bp
GGGGTAGTTCAGCCGTTTGGGTTTCTCTTTCCTTGAGAATTGAGACGATA
CGGAGATGGGAAAGATGCAATCTTTCAAGGACGAGTTCACATTCGAGCAA
AGACTTGAAGAATCGCGCGAAATCATTGCGAAATACCCCGATCGAGTCCC
CGTAATTGCGGAAAGATATTCAAAAGCTGACCTTCCTGATATGGAAAAGA
AAAAATTTCTGGTTCCTCGGGACATGTCTGTTGGGCAATTTATTCACATT
TTAAGCAGCAGGCTTCACCTGACCCCTGGAAAAGCTCTCTTTGTATTTGT
GAAAGATACTTTACCGCAAACAGCGACTTTAATGGACTCAGTCTATGAAT
CCTTCAAGGATGAGGATGGATTCCTGTATATGTGCTACAGCAGTGAGAAA
ACCTTTGGTTATGAAAGAATTCAGACTTGTTAATACTTGAACTTTGTTCA
TGGCTGTGTGCTACTGTGCTTTACATGCCACTCCTTGTTGTGAAATGATG
TATATAACTCAGCATGGCCATTGATGTTGTATTATCTGTCTTAGTCTTAT
TCTGCAGATTGTTTAAACATCAGAAATGTCTCGTGTGTGGATATAA
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