BQ623766

Overview
NameBQ623766
Unique NameBQ623766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9450 contig Csv1_Contig9450:114..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623766 vs. ExPASy Swiss-Prot
Match: UBP13_ARATH (Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana GN=UBP13 PE=1 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 1.474e-98
Identity = 172/200 (86.00%), Postives = 186/200 (93.00%), Query Frame = 3
Query:    3 VLDIPLPELQGLKNLKVAFHHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHPNAELRLLEVFYHKIYKIFAPNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKESAQNQMQVQNFGEPFFLVIHEGETLAEVKERIQRKLQVPDEEFSKWKFAFLSLGRPEYLVDTDTVFNRFQRRDVYGAWEQYLG 602
            VLDIPLPELQGLK LKVAFH ATKDEV+IHNIRLPKQSTVGDVINELKTKVELSH +AELRLLEVF+HKIYKIF   E+IENINDQYWTLRAEEIPEEEKN+GPNDRLIHVYHFTKE+ QNQ QVQNFGEPFFLVIHEGETL E+K RIQ+KL VPDE+F+KWKFA  S+GRP+YL+DTD V+NRFQRRDVYGAWEQYLG
Sbjct:  888 VLDIPLPELQGLKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQ-QVQNFGEPFFLVIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDVYGAWEQYLG 1086          
BLAST of BQ623766 vs. ExPASy Swiss-Prot
Match: UBP12_ARATH (Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=2 SV=2)

HSP 1 Score: 356.681 bits (914), Expect = 5.599e-98
Identity = 173/200 (86.50%), Postives = 186/200 (93.00%), Query Frame = 3
Query:    3 VLDIPLPELQGLKNLKVAFHHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHPNAELRLLEVFYHKIYKIFAPNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKESAQNQMQVQNFGEPFFLVIHEGETLAEVKERIQRKLQVPDEEFSKWKFAFLSLGRPEYLVDTDTVFNRFQRRDVYGAWEQYLG 602
            VLDIPLPELQGLK LKVAFHHATK+EVVIHNIRLPKQSTVGDVINELKTKVELSHP+AELRLLEVFYHKIYKIF   E+IENINDQYWTLRAEEIPEEEKN+GPNDRLI VYHF KE+ QNQ QVQNFGEPFFLVIHEGETL E+K RIQ+KL V DE+F+KWKFAF+S+GRPEYL DTD V+NRFQRRDVYGA+EQYLG
Sbjct:  889 VLDIPLPELQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKIYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQ-QVQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGAFEQYLG 1087          
BLAST of BQ623766 vs. ExPASy Swiss-Prot
Match: UBP21_SCHPO (Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces pombe GN=ubp21 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.178e-17
Identity = 69/193 (35.75%), Postives = 106/193 (54.92%), Query Frame = 3
Query:    3 VLDIPLPELQGLKNLKVAF-----HHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHPNAE-LRLLEVFYHKIYKIFAPNEKIENINDQYWTLRAEEIPEEEK-NLGPNDRL-IHVYHFTKESAQNQMQVQNFGEPFFLVIHEGETLAEVKERIQRKLQVPDEEFSKWKFAFL---SLGRPEYLVDTDTV 548
            VLDI L EL+  + ++V F      H T+ E  +      K+ TV D++ ++  KV L+  +A  LRL EV+ H+I K   P + I ++N+ + T   E  P+EE+  L  +D + I V HF K+ ++          PF+ V+  GETL ++K+R+Q++L   D +FSK K A L   S G+P YL D D V
Sbjct:  914 VLDITLSELERKQLIRVHFLSNGISHETQMEFYVD-----KEGTVEDILRQVTQKVPLNAEDASRLRLYEVYNHRILKSHLPTDGIYDLNE-FSTAYVEVTPKEEQMQLKTDDAVSIVVQHFFKDLSRLH------DIPFYFVLLRGETLKDLKKRLQKRLGYNDTQFSKVKLAVLQAQSFGKPYYLTDDDEV 1094          
BLAST of BQ623766 vs. ExPASy Swiss-Prot
Match: UBP7_RAT (Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus GN=Usp7 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.412e-16
Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 3
Query:  108 KQSTVGDVINELKTKVELS-HPNAELRLLEVFYHKIYKIFAPNEKIENINDQYW-TLRAEEIPEEEKNLGP-NDRLIHVYHFTKESAQNQMQVQNFGEPFFLVIHEGETLAEVKERIQRKLQVPDEEFSKWKFAFLSLGRPEYLVDTDTVFN 554
            K   V D++ E K  VEL    +  LRLLE+  +KI  +   +E +E ++     T R EEIP ++ N+   N+ LI V HF KE          FG PF L IH+GE   EV +RIQ  L + ++EF K+KFA + +GR +Y+ + +   N
Sbjct:  915 KHGCVRDLLEECKKAVELGDEASGRLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVNIDKENEMLITVAHFHKEV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKFAIVMMGRHQYINEDEYEVN 1060          
BLAST of BQ623766 vs. ExPASy Swiss-Prot
Match: UBP7_HUMAN (Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.364e-16
Identity = 55/152 (36.18%), Postives = 84/152 (55.26%), Query Frame = 3
Query:  108 KQSTVGDVINELKTKVELSHP-NAELRLLEVFYHKIYKIFAPNEKIENINDQYW-TLRAEEIPEEEKNLGP-NDRLIHVYHFTKESAQNQMQVQNFGEPFFLVIHEGETLAEVKERIQRKLQVPDEEFSKWKFAFLSLGRPEYLVDTDTVFN 554
            K   V D++ E K  VEL    + +LRLLE+  +KI  +   +E +E ++     T R EEIP ++ ++   N+ L+ V HF KE          FG PF L IH+GE   EV +RIQ  L + ++EF K+KFA + +GR +Y+ + +   N
Sbjct:  914 KHGCVRDLLEECKKAVELGEKASGKLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVDIDKENEMLVTVAHFHKEV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKFAIVMMGRHQYINEDEYEVN 1059          
BLAST of BQ623766 vs. ExPASy Swiss-Prot
Match: UBP7_MOUSE (Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.006e-16
Identity = 56/152 (36.84%), Postives = 83/152 (54.61%), Query Frame = 3
Query:  108 KQSTVGDVINELKTKVELSHP-NAELRLLEVFYHKIYKIFAPNEKIENINDQYW-TLRAEEIPEEEKNLGP-NDRLIHVYHFTKESAQNQMQVQNFGEPFFLVIHEGETLAEVKERIQRKLQVPDEEFSKWKFAFLSLGRPEYLVDTDTVFN 554
            K   V D++ E K  VEL    +  LRLLE+  +KI  +   +E +E ++     T R EEIP ++ ++   N+ LI V HF KE          FG PF L IH+GE   EV +RIQ  L + ++EF K+KFA + +GR +Y+ + +   N
Sbjct:  915 KHGCVRDLLEECKKAVELGDKASGRLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVDIDKENEMLITVAHFHKEV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKFAIVMMGRHQYINEDEYEVN 1060          
BLAST of BQ623766 vs. ExPASy Swiss-Prot
Match: UBP7_CHICK (Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.662e-15
Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  108 KQSTVGDVINELKTKVELSHPNA-ELRLLEVFYHKIYKIFAPNEKIENINDQYW-TLRAEEIPEEEKNLGP-NDRLIHVYHFTKESAQNQMQVQNFGEPFFLVIHEGETLAEVKERIQRKLQVPDEEFSKWKFAFLSLGRPEYLVDTDTVFN 554
            K   V D++ E K  VELS   + +LRLLE+  +KI  +   +E +E ++     T R EEIP  + ++   N+ LI V HF KE          FG PF L IH+G    EV +RIQ  L + ++EF K+KFA + +GR  YL + +   N
Sbjct:  914 KHGCVRDLLEECKKVVELSEKGSGKLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLAQVDIDKENEMLITVAHFHKEV------FGTFGIPFLLRIHQGGHFREVMKRIQTMLDIQEKEFEKFKFAIVMMGRHTYLNEDEYEVN 1059          
BLAST of BQ623766 vs. ExPASy Swiss-Prot
Match: UBP7_DROME (Ubiquitin carboxyl-terminal hydrolase 7 OS=Drosophila melanogaster GN=Usp7 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.012e-14
Identity = 63/207 (30.43%), Postives = 95/207 (45.89%), Query Frame = 3
Query:    6 LDIPLPELQGLKNLKVAFHHAT-KDEVVIHNIRLP-KQSTVGDVINELKTKVELS-HPNAELRLLEVFYHKIYKI----------FAPNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKESAQNQMQVQNFGEPFFLVIHEGETLAEVKERIQRKLQVPDEEFSKWKFAFLSLGRPEYLVDTDTVFNRFQRRDVYGAW 587
            L + + EL   K  K  +  +  KDE  +  +  P K  TV  ++ E   K+  + +   +LRLL++  HKI  +             NE I        T R EE+P E+  L  N+ LI V HF+KE         +FG PF     +GE    +K+RIQR+L V D+E+  +KF  +S+G      + D   N     +VY +W
Sbjct:  903 LSLSIHELDNKKQFKCVWVSSDLKDEKEL--VLYPNKNDTVKGLLEEAAKKISFAENSRRKLRLLKISNHKIVAVCKDDIPLDTLLKSNESITTAQGAQKTFRIEEVPAEDMQLAENEFLIPVAHFSKEL------YNSFGIPFLTKARQGEPYGALKQRIQRRLNVQDKEWENYKFCVISMGH-----NADVNDNTPVDLEVYRSW 1096          
The following BLAST results are available for this feature:
BLAST of BQ623766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
UBP13_ARATH1.474e-9886.00Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabid... [more]
UBP12_ARATH5.599e-9886.50Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabid... [more]
UBP21_SCHPO2.178e-1735.75Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizo... [more]
UBP7_RAT1.412e-1637.50Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus ... [more]
UBP7_HUMAN5.364e-1636.18Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sa... [more]
UBP7_MOUSE7.006e-1636.84Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus mus... [more]
UBP7_CHICK2.662e-1537.50Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus ... [more]
UBP7_DROME1.012e-1430.43Ubiquitin carboxyl-terminal hydrolase 7 OS=Drosoph... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00857 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00857 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623766 ID=BQ623766; Name=BQ623766; organism=Citrus sinensis; type=EST; length=626bp
AAGTTTTAGATATTCCTCTTCCCGAATTGCAAGGTTTGAAAAATCTGAAA
GTTGCATTCCATCATGCTACCAAGGATGAGGTGGTAATTCACAACATTAG
ATTACCCAAACAGAGCACTGTAGGTGATGTGATTAATGAACTTAAAACAA
AGGTGGAATTATCCCATCCAAATGCAGAACTAAGATTGCTTGAAGTTTTC
TATCACAAGATATATAAGATCTTTGCCCCCAATGAAAAAATAGAGAATAT
AAATGATCAATACTGGACCCTTCGTGCAGAGGAGATCCCGGAGGAAGAGA
AGAACCTTGGTCCCAACGATCGCTTGATTCATGTTTACCACTTTACGAAA
GAGTCTGCACAGAATCAAATGCAAGTACAAAATTTTGGGGAACCATTTTT
CTTGGTTATCCATGAAGGTGAAACATTAGCCGAAGTTAAAGAGCGCATAC
AAAGGAAATTGCAAGTTCCTGATGAGGAGTTCTCTAAGTGGAAGTTTGCT
TTCTTATCACTGGGTCGTCCAGAGTACCTTGTGGATACTGACACTGTTTT
CAACCGTTTTCAGAGACGAGACGTTTATGGTGCTTGGGAACAGTACCTTG
GGTTTGGAGCATTCTGATAATGCTCC
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