BQ623776

Overview
NameBQ623776
Unique NameBQ623776
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
BQ623776_ssr314 microsatellite BQ623776_ssr314:314..325. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5380 contig Csv1_Contig5380:150..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.607e-56
Identity = 103/174 (59.20%), Postives = 129/174 (74.14%), Query Frame = 1
Query:   10 PVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCWS 531
            P+YTLEMCMT   +K      +        +MT+ SGIRKILP S+ICDF+F+PCGYSMN++EG  +STIHVTPEDGFSYASFEA+GYDF+ V L  L++RVL+CF+PAEFSVALH D +G++    F LD+KGY+CGE+ YE LG  GS++Y  F+ T    SPRS L CCWS
Sbjct:  178 PIYTLEMCMTGLDKKSASVFFKTQ-SSSAAVMTDASGIRKILPGSDICDFDFEPCGYSMNAVEGGTISTIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFELDVKGYACGERSYEALGKGGSIMYCGFTSTGSCGSPRSTLLCCWS 350          
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.105e-56
Identity = 103/174 (59.20%), Postives = 128/174 (73.56%), Query Frame = 1
Query:   10 PVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCWS 531
            P+YTLEMCMT   +K      +        +MT+ SGIRKILP SEICDF+F+PCGYSMN++EG A+S IHVTPEDGFSYASFEA+GYDF+ V L  L++RVL+CF+PAEFSVALH D +G++    F LD+KGY+CGE+ YE L   GS++Y  F+ T    SPRS L CCWS
Sbjct:  178 PIYTLEMCMTGLDKKSASVFFKTQ-SSSAAVMTDASGIRKILPGSEICDFDFEPCGYSMNAVEGGAISPIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFKLDVKGYACGERSYEGLNKGGSIMYCGFTSTGSCGSPRSTLLCCWS 350          
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.078e-52
Identity = 106/174 (60.92%), Postives = 122/174 (70.11%), Query Frame = 1
Query:    7 NPVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 528
            +P YTLEMCMT   +++     ++       LMT  SGIRKILP SEICDFEFDPCGYSMNSIE  A+STIHVTPEDGFSYASFEA GYD +   L  ++ERVLACF+P+EFSVA+H D+          L+LK YS  EKI EELG  GS+IY  F R D   SPRSILKCCW
Sbjct:  177 DPTYTLEMCMTGLDREKASVFYKSE-SSSAALMTTRSGIRKILPDSEICDFEFDPCGYSMNSIEEAAISTIHVTPEDGFSYASFEAAGYDLKAQNLGMMIERVLACFQPSEFSVAVHCDVTCKSLEQICSLELKEYSLDEKINEELGLGGSIIYKKFLRIDACGSPRSILKCCW 349          
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.191e-51
Identity = 101/174 (58.05%), Postives = 125/174 (71.84%), Query Frame = 1
Query:    7 NPVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 528
            +PVYTLEMCMT   +++     +         MT  SGIRKILP SEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD + ++L PL+ERVLACF+PAEFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F++T    SP+S+LK CW
Sbjct:  179 DPVYTLEMCMTGLDREKASVFYKTEGSSA-AHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDLKTMELGPLVERVLACFEPAEFSIALHADVATKLLERVCCVDVKGYSLAEWSPEEFGKGGSIVYQKFTKTPYCASPKSVLKGCW 351          
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.556e-51
Identity = 102/174 (58.62%), Postives = 124/174 (71.26%), Query Frame = 1
Query:    7 NPVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 528
            +PVYTLEMCMT   +++     +         MT  SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F+RT    SP+S+LK CW
Sbjct:  179 DPVYTLEMCMTGLDREKASVFYKTEGSSA-AHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351          
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.556e-51
Identity = 102/174 (58.62%), Postives = 124/174 (71.26%), Query Frame = 1
Query:    7 NPVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 528
            +PVYTLEMCMT   +++     +         MT  SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F+RT    SP+S+LK CW
Sbjct:  179 DPVYTLEMCMTGLDREKASVFYKTEGSSA-AHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351          
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.032e-51
Identity = 102/174 (58.62%), Postives = 127/174 (72.99%), Query Frame = 1
Query:    7 NPVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 528
            +PVYTLEMCMT   +++     +   +     MT  SGIRKILPKSEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGF+YASFE+VGY+ + ++L PL+ERVLACF+PAEFSVALH+D+          +D+KGYS  E   EE G  GS++Y  F+RT    SP+S+LK CW
Sbjct:  179 DPVYTLEMCMTGLDREKASVFYKTE-ESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADVATKLLERICSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCW 351          
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.913e-51
Identity = 101/174 (58.05%), Postives = 124/174 (71.26%), Query Frame = 1
Query:    7 NPVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 528
            +PVYTLEMCM    +++     +   +     MT  SGIRKILPK EICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD +  +L PL+ERVLACF+PAEFS+ALH+D+          +D+KGYS  E   EE G  GS++Y  F+RT    SP+S+LK CW
Sbjct:  177 DPVYTLEMCMAGLDREKASVFYKTE-ESSAAHMTVRSGIRKILPKFEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDPKTTELGPLVERVLACFEPAEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPYCESPKSVLKGCW 349          
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.247e-50
Identity = 105/178 (58.99%), Postives = 132/178 (74.16%), Query Frame = 1
Query:   10 PVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALH--SDIVGDEHGDTFMLDLKGYSCGEKIYEEL-GNNGSLIYYSFSRTDCST-SPRSILKCCWS 531
            PVYTLEM MT   ++      ++       +MTEDSGIRKILP+S+ICDF+FDPCGYSMN+IEGDA+STIHVTPEDGFSYASFEAVGYDF+ + LT L+ERVLACF+P+EFSVALH   ++V D + +   +++KGY+  E  +E L G  GS++YY F+R   S  SPRS L  CWS
Sbjct:  178 PVYTLEMSMTGLSKRNASVFFKSE-SSSAAVMTEDSGIRKILPESQICDFDFDPCGYSMNAIEGDAISTIHVTPEDGFSYASFEAVGYDFKSMGLTVLIERVLACFEPSEFSVALHGNENVVKDLNLENNDVNVKGYNVEETKFEVLGGEGGSMVYYGFARGGSSCGSPRSTLHRCWS 354          
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Match: DCAM3_BRAJU (S-adenosylmethionine decarboxylase proenzyme 3 OS=Brassica juncea GN=SAMDC3 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.935e-50
Identity = 99/178 (55.62%), Postives = 130/178 (73.03%), Query Frame = 1
Query:    7 NPVYTLEMCMTWFGQKEGICLLQN**KPQWPLMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRTD--CSTSPRSILKCCWS 531
            N VYTLEMCMT   +++     +N    +   MT++SGIRKILPKS+ICDFEF+PCGYSMNS+EGDA+STIHVTPEDGFSYASFEAVGYDF  + L+ L+ RVL+CF+P +FSVA+HS +  + +     +DL+ Y C E+ +E LG  +G+++Y +F +    C  SPRS LKC WS
Sbjct:  176 NNVYTLEMCMTGLDKEKASVFYKNETGGENGSMTDNSGIRKILPKSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGSNAYKPEISVDLEDYGCRERTFESLGEESGTVMYQTFEKLGKYCG-SPRSTLKCEWS 352          
The following BLAST results are available for this feature:
BLAST of BQ623776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
DCAM_IPONI1.607e-5659.20S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_IPOBA6.105e-5659.20S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_CATRO1.078e-5260.92S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_DATST1.191e-5158.05S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_TOBAC1.556e-5158.62S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_NICSY1.556e-5158.62S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_SOLTU2.032e-5158.62S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_SOLCI5.913e-5158.05S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_HELAN2.247e-5058.99S-adenosylmethionine decarboxylase proenzyme OS=He... [more]
DCAM3_BRAJU2.935e-5055.62S-adenosylmethionine decarboxylase proenzyme 3 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00867 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00867 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623776 ID=BQ623776; Name=BQ623776; organism=Citrus sinensis; type=EST; length=673bp
CATGTAAACCCAGTTTACACTCTAGAGATGTGCATGACCTGGTTTGGACA
GAAAGAGGGCATCTGTCTTCTACAAAACTAATGAAAGCCTCAGTGGCCTC
TGATGACCGAGGACTCTGGCATCAGAAAGATTCTTCCAAAATCTGAGATT
TGTGATTTTGAGTTTGACCCTTGTGGTTACTCCATGAATAGTATTGAAGG
GGATGCAGTATCTACTATCCACGTCACACCTGAAGATGGTTTCAGTTATG
CAAGTTTTGAGGCTGTGGGTTATGATTTTGAGGTTGTGAAGTTGACTCCC
TTGCTTGAGAGGGTGCTTGCTTGCTTCAAACCCGCTGAGTTTTCTGTTGC
TCTGCATTCTGACATTGTTGGCGATGAACATGGAGACACCTTCATGCTGG
ACTTGAAGGGATATTCTTGTGGAGAAAAGATATATGAAGAGCTCGGTAAT
AATGGTTCGCTGATCTACTACAGCTTTTCGAGGACTGATTGCTCCACATC
TCCTAGGTCAATCTTGAAATGCTGTTGGAGCGAGGACGAGAAGGACGAGG
AAGTTGAAGGGAAATAGTGTCCCGGATATAATATTGGGTTTGGTTTTTTC
ATTTTAATCCTTCGCTTATATAATAAAATGTGGGGGGGGTATGTAATGGT
AGGGCTTGAGCAGCCTTACCTTT
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