BQ623777

Overview
NameBQ623777
Unique NameBQ623777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length385
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ623777 vs. ExPASy Swiss-Prot
Match: BAHD1_ARATH (BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.960e-15
Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 3 
Query:    6 FWVTSWCKTPLYEADFGWGNPKWAGNSMRLNQITVFF----DSSDGEGVEAWVGLPRKDMARFEKDSGILAYTSPNPSI 230
            + ++SWC+   YE DFGWG P W G   +  Q  V +    D+ DGEGVE WVG+P +DMA F  D  +L+Y S NP +
Sbjct:  363 YTMSSWCRKAFYEVDFGWGRPAWVGLGHQDIQDGVMYVLLVDAKDGEGVEVWVGIPEQDMAAFVCDQELLSYASLNPPV 441
The following BLAST results are available for this feature:
BLAST of BQ623777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BAHD1_ARATH2.960e-1545.57BAHD acyltransferase At5g47980 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00868 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00868 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623777 ID=BQ623777; Name=BQ623777; organism=Citrus sinensis; type=EST; length=385bp
GGGAGTTTTGGGTTACTAGTTGGTGCAAAACTCCGCTGTATGAAGCTGAT
TTCGGGTGGGGGAATCCTAAGTGGGCAGGCAACTCCATGAGGCTTAATCA
GATTACTGTTTTCTTTGACAGTAGTGATGGTGAGGGAGTTGAAGCTTGGG
TGGGGTTGCCCAGAAAAGACATGGCTCGATTTGAAAAAGATTCTGGCATC
CTTGCTTACACTTCCCCTAATCCAAGCATATTTTGAGGGTTTATTTATTT
TTATTGCACTGTTTGTTATTTGTACTGGCTTGCTGGGAACATATTCTGGC
AAATTTCGCTGATGCAAGTATCATTCTCCATAAAAATGTCAACAAAAAAA
AAAAATGGCCTACGATATAGAGGTAAAATAGTCAT
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