BQ623780

Overview
NameBQ623780
Unique NameBQ623780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.417e-42
Identity = 94/210 (44.76%), Postives = 127/210 (60.48%), Query Frame = 3
Query:    9 RQRLLVYEYMNHGSLDRILF---GN-----GPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSHXXXXXXXXXXXXXXXXXALVYFPLLALEMHEQGKYLELADPRL--EGRVTNEEVEKLVCIAL 608
            R R LVY+Y+ + SLD  +F   GN     G  L W++R+ +A+  A+ LAYLH  C  KI+H D+KPENILL  +F+A ++DFGLSKL+  ++S + T +RGTRGYLAPEWL    ISEK+DVYS+G+VLLE++ GRR+ S                        L YFP +  +   + K +E+ D RL     V  EEV KLVC+AL
Sbjct:  172 RPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEHGISEKSDVYSYGIVLLEMIGGRRSIS-------------RVEVKETKKKKLEYFPRIVNQKMRERKIMEIVDQRLIEVNEVDEEEVMKLVCVAL 368          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 8.377e-35
Identity = 84/203 (41.38%), Postives = 117/203 (57.64%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGPV-LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSHXXXXXXXXXXXXXXXXXALVYFPLLALEMHEQGKYLELADPRLEGRVTNEEVEKLVCIAL 608
            +G  RLLVYEY+ +GSLD+ LFG   + L+W  R++I LG ARGL YLH     +I+H D+K  NILL      K+SDFGL+KL   +++ + T + GT GYLAPE+     ++EKTDVY+FG+V LELVSGR N     +                      Y    A  +HE+G+ +EL D +L      EE ++++ IAL
Sbjct:  758 EGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKR------------------YLLEWAWNLHEKGREVELIDHQLT-EFNMEEGKRMIGIAL 941          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 8.377e-35
Identity = 75/136 (55.15%), Postives = 100/136 (73.53%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGP--VLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSL-FTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            +G  RLLV EY+ +GSL  ILF  G   +L+W+ RF+IALG A+GLAYLH  C + +IHCD+KPENILL   F+ KI+DFGL KLL    S+   + +RGT GY+APEW+++  I+ K DVYS+G+VLLEL++G R
Sbjct:  598 EGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTR 733          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.183e-34
Identity = 82/203 (40.39%), Postives = 117/203 (57.64%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGPV-LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSHXXXXXXXXXXXXXXXXXALVYFPLLALEMHEQGKYLELADPRLEGRVTNEEVEKLVCIAL 608
            +G  R+LVYEY+ +GSLD+ LFG+  + L+W  R++I LG ARGL YLH     +I+H D+K  NILL      +ISDFGL+KL   +++ + T + GT GYLAPE+     ++EKTDVY+FG+V LELVSGR N     +                      Y    A  +HE+ + +EL D +L      EE ++++ IAL
Sbjct:  759 EGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKK------------------YLLEWAWNLHEKSRDIELIDDKLTD-FNMEEAKRMIGIAL 942          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.262e-34
Identity = 84/205 (40.98%), Postives = 114/205 (55.61%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGPV---LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSHXXXXXXXXXXXXXXXXXALVYFPLLALEMHEQGKYLELADPRLEGRVTNEEVEKLVCIAL 608
            +G++ LLVYEY+ + SL R LFG       L+W  R  I +G A+GLAYLH     KI+H DIK  N+LL     AKISDFGL+KL   E + + T + GT GY+APE+     +++K DVYSFG+V LE+VSG+ N + R +                     VY    A  + EQG  LEL DP L    + +E  +++ IAL
Sbjct:  734 EGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEE------------------FVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIAL 920          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.063e-33
Identity = 82/205 (40.00%), Postives = 114/205 (55.61%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGPV---LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSHXXXXXXXXXXXXXXXXXALVYFPLLALEMHEQGKYLELADPRLEGRVTNEEVEKLVCIAL 608
            +G++ LLVYEY+ + SL R LFG       L+W  R  + +G A+GLAYLH     KI+H DIK  N+LL     AKISDFGL+KL   E + + T + GT GY+APE+     +++K DVYSFG+V LE+VSG+ N + R +                     +Y    A  + EQG  LEL DP L    + +E  +++ IAL
Sbjct:  732 EGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEE------------------FIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIAL 918          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 4.597e-33
Identity = 83/203 (40.89%), Postives = 118/203 (58.13%), Query Frame = 3
Query:   12 QRLLVYEYMNHGSLDRILF----GNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSHXXXXXXXXXXXXXXXXXALVYFPLLALEMHEQGKYLELADPRLEGRVTNEEVEKLVCIAL 608
            +RLLVY YM +GS+   L     GN P L+W +R  IALG+ARGLAYLH  C+QKIIH D+K  NILL   F+A + DFGL+KL+    S + T +RGT G++APE+L+    SEKTDV+ +G++LLEL++G++       ++                           E+ ++ K   L D  LEG+    EVE+L+ +AL
Sbjct:  344 ERLLVYPYMANGSVASCLRERPEGN-PALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDW----------------VKEVLKEKKLESLVDAELEGKYVETEVEQLIQMAL 529          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.003e-33
Identity = 66/129 (51.16%), Postives = 94/129 (72.87%), Query Frame = 3
Query:   15 RLLVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            +LL+Y+Y+  GSLD  L   G  L+W  R +I +G A+GL+YLH  C  +IIH DIK  NILL  + +A++SDFGL+KLL  E+S + T + GT GYLAPE++ +   +EKTDVYSFG+++LE++SG+R
Sbjct:  375 KLLLYDYLPGGSLDEALHERGEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKR 503          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 7.841e-33
Identity = 83/203 (40.89%), Postives = 118/203 (58.13%), Query Frame = 3
Query:   12 QRLLVYEYMNHGSLDRILF----GNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSHXXXXXXXXXXXXXXXXXALVYFPLLALEMHEQGKYLELADPRLEGRVTNEEVEKLVCIAL 608
            +RLLVY YM +GS+   L     GN P L+W +R  IALG+ARGLAYLH  C+QKIIH D+K  NILL   F+A + DFGL+KL+    S + T +RGT G++APE+L+    SEKTDV+ +G++LLEL++G++       ++                           E+ ++ K   L D  LEG+    EVE+L+ +AL
Sbjct:  363 ERLLVYPYMANGSVASCLRERPEGN-PALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDW----------------VKEVLKEKKLESLVDAELEGKYVETEVEQLIQMAL 548          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.024e-32
Identity = 66/128 (51.56%), Postives = 93/128 (72.66%), Query Frame = 3
Query:   15 RLLVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGR 398
            +LL+Y+Y+  GSLD  L   G  L+W  R +I +G A+GLAYLH  C  +IIH DIK  NILL  + +A++SDFGL+KLL  E+S + T + GT GYLAPE++ +   +EKTDVYSFG+++LE++SG+
Sbjct:  373 KLLLYDYLPGGSLDEALHKRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGK 500          
The following BLAST results are available for this feature:
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
Y5005_ARATH5.417e-4244.76Probable receptor-like protein kinase At5g20050 OS... [more]
Y5614_ARATH8.377e-3541.38Probable LRR receptor-like serine/threonine-protei... [more]
KPRO_MAIZE8.377e-3555.15Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
Y1561_ARATH3.183e-3440.39Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH9.262e-3440.98Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH2.063e-3340.00Probable LRR receptor-like serine/threonine-protei... [more]
SERK5_ARATH4.597e-3340.89Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
FEI1_ARATH6.003e-3351.16LRR receptor-like serine/threonine-protein kinase ... [more]
SERK4_ARATH7.841e-3340.89Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
FEI2_ARATH1.024e-3251.56LRR receptor-like serine/threonine-protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00871 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00871 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623780 ID=BQ623780; Name=BQ623780; organism=Citrus sinensis; type=EST; length=610bp
CTCAAGGGAGACAACGCCTACTGGTATATGAGTATATGAATCACGGCTCA
CTGGACCGTATCCTCTTTGGAAATGGTCCTGTCTTGGAATGGCAAGAGAG
GTTTGATATAGCACTGGGAACTGCTCGGGGGCTTGCATATTTGCACAGTG
GTTGTGAACAAAAGATCATTCATTGTGATATCAAACCAGAAAACATTCTC
TTGCACTATCATTTTCAGGCAAAGATATCTGATTTTGGGCTCTCAAAGCT
TCTAACTCCTGAGCAGTCTAGTCTGTTCACAACAATGAGAGGCACTCGTG
GCTACCTTGCACCTGAATGGCTTACAAACTCTGCAATATCAGAAAAAACT
GATGTTTATAGTTTTGGAATGGTACTGCTTGAACTTGTGAGTGGGAGGAG
AAATTGCTCACCACGATCACAAAGTCATAGCATGGATAGTAATAGTAGTG
GGGTTCCCTCTTCATCGTCGTCAGCCTCAGCACTTGTTTATTTTCCACTA
TTGGCATTGGAAATGCACGAGCAAGGAAAGTACTTGGAGCTGGCTGACCC
AAGATTAGAAGGCAGAGTTACAAATGAGGAGGTGGAAAAATTAGTGTGTA
TTGCTTTGTG
back to top