BQ623788

Overview
NameBQ623788
Unique NameBQ623788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL_MALDO (Beta-galactosidase OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 3.112e-66
Identity = 119/160 (74.38%), Postives = 138/160 (86.25%), Query Frame = 3
Query:    3 TASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 482
            T SS + +T T DGL+EQ+ +T D +DYLWYMTD+ I S+E FLKNG+ PLLTI+SAGHAL VFINGQLSGTVYGSLENPKL+FS+NV LR+G+NK++LLS SVGLPNVGTHFE WNAGVLGP+TLKGLN GT D+S  KWTYK GLKGEAL LHTV+GS
Sbjct:  440 TTSSDETDTTTLDGLYEQINITRDTTDYLWYMTDITIGSDEAFLKNGKSPLLTIFSAGHALNVFINGQLSGTVYGSLENPKLSFSQNVNLRSGINKLALLSISVGLPNVGTHFETWNAGVLGPITLKGLNSGTWDMSGWKWTYKTGLKGEALGLHTVTGS 599          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL_SOLLC (Beta-galactosidase OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 2.913e-64
Identity = 116/159 (72.96%), Postives = 135/159 (84.91%), Query Frame = 3
Query:    6 ASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 482
            A+S +D+TFT  GL EQ+ +T D SDYLWYMTD+ ID  EGFL +G  P LT++SAGHAL VF+NGQL+GTVYGSLENPKLTFS  + LRAGVNKISLLS +VGLPNVG HFE WNAGVLGPV+L GLNEGTRD++ QKW YK+GLKGEALSLH++SGS
Sbjct:  439 AASHEDDTFTVVGLLEQINITRDVSDYLWYMTDIEIDPTEGFLNSGNWPWLTVFSAGHALHVFVNGQLAGTVYGSLENPKLTFSNGINLRAGVNKISLLSIAVGLPNVGPHFETWNAGVLGPVSLNGLNEGTRDLTWQKWFYKVGLKGEALSLHSLSGS 597          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL1_ARATH (Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 1.954e-60
Identity = 109/154 (70.78%), Postives = 128/154 (83.12%), Query Frame = 3
Query:   21 DNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 482
            D +FT  GL EQ+  T D SDYLWYMTDV +D+NEGFL+NG  P LT+ SAGHA+ VFINGQLSG+ YGSL++PKLTF K V LRAG NKI++LS +VGLPNVG HFE WNAGVLGPV+L GLN G RD+S QKWTYK+GLKGE+LSLH++SGS
Sbjct:  456 DESFTMVGLVEQINTTRDTSDYLWYMTDVKVDANEGFLRNGDLPTLTVLSAGHAMHVFINGQLSGSAYGSLDSPKLTFRKGVNLRAGFNKIAILSIAVGLPNVGPHFETWNAGVLGPVSLNGLNGGRRDLSWQKWTYKVGLKGESLSLHSLSGS 609          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL4_ARATH (Beta-galactosidase 4 OS=Arabidopsis thaliana GN=BGAL4 PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.160e-59
Identity = 106/156 (67.95%), Postives = 128/156 (82.05%), Query Frame = 3
Query:    3 TASSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHT 470
            T ++ +  TF ++GL EQ+ +T D SDY WY+TD+ I S E FLK G  PLLT+ SAGHAL VF+NGQLSGT YG L++PKLTFS+ +KL AGVNKI+LLS +VGLPNVGTHFE+WN GVLGPVTLKG+N GT D+SK KW+YKIG+KGEALSLHT
Sbjct:  442 TPTANEAGTFARNGLVEQISMTWDKSDYFWYITDITIGSGETFLKTGDSPLLTVMSAGHALHVFVNGQLSGTAYGGLDHPKLTFSQKIKLHAGVNKIALLSVAVGLPNVGTHFEQWNKGVLGPVTLKGVNSGTWDMSKWKWSYKIGVKGEALSLHT 597          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL_ASPOF (Beta-galactosidase OS=Asparagus officinalis PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.685e-59
Identity = 111/155 (71.61%), Postives = 126/155 (81.29%), Query Frame = 3
Query:   18 DDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 482
            +DNTFTKDGL EQ+  T D SDYLWY T V+I  NE FLK G+ P LT+ SAGHA+ VFINGQLSGT YGSL+NPKLT+S + KL AG NKIS+LS SVGLPNVG HFE WN GVLGPVTL GLNEG RD+S QKWTY+IGL GE LSLH+++GS
Sbjct:  444 NDNTFTKDGLVEQLSTTWDRSDYLWYTTYVDIAKNEEFLKTGKYPYLTVMSAGHAVHVFINGQLSGTAYGSLDNPKLTYSGSAKLWAGSNKISILSVSVGLPNVGNHFETWNTGVLGPVTLTGLNEGKRDLSLQKWTYQIGLHGETLSLHSLTGS 598          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL2_ARATH (Beta-galactosidase 2 OS=Arabidopsis thaliana GN=BGAL2 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.685e-59
Identity = 103/158 (65.19%), Postives = 129/158 (81.65%), Query Frame = 3
Query:    9 SSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 482
            SS +  TF KDGL EQ+ +T D +DY WY TD+ I S+E FLK G +PLLTI+SAGHAL VF+NG L+GT YG+L N KLTFS+N+KL  G+NK++LLST+VGLPN G H+E WN G+LGPVTLKG+N GT D+SK KW+YKIGL+GEA+SLHT++GS
Sbjct:  444 SSNEAGTFVKDGLVEQISMTRDKTDYFWYFTDITIGSDESFLKTGDNPLLTIFSAGHALHVFVNGLLAGTSYGALSNSKLTFSQNIKLSVGINKLALLSTAVGLPNAGVHYETWNTGILGPVTLKGVNSGTWDMSKWKWSYKIGLRGEAMSLHTLAGS 601          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGA12_ARATH (Beta-galactosidase 12 OS=Arabidopsis thaliana GN=BGAL12 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.389e-58
Identity = 104/158 (65.82%), Postives = 130/158 (82.28%), Query Frame = 3
Query:    9 SSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 482
            S+ D+ TF++DGL EQ+ +T D +DY WY+TD+ I  +E FL  G+DPLLTI SAGHAL VF+NGQL+GT YGSLE PKLTFS+ +KL AGVNK++LLST+ GLPNVG H+E WN GVLGPVTL G+N GT D++K KW+YKIG KGEALS+HT++GS
Sbjct:  446 SANDNGTFSQDGLVEQISITRDKTDYFWYLTDITISPDEKFL-TGEDPLLTIGSAGHALHVFVNGQLAGTAYGSLEKPKLTFSQKIKLHAGVNKLALLSTAAGLPNVGVHYETWNTGVLGPVTLNGVNSGTWDMTKWKWSYKIGTKGEALSVHTLAGS 602          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL9_ORYSJ (Beta-galactosidase 9 OS=Oryza sativa subsp. japonica GN=Os06g0573600 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 6.950e-58
Identity = 106/158 (67.09%), Postives = 127/158 (80.38%), Query Frame = 3
Query:    9 SSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 482
            +S D+  FTKDGL EQ+ +T D SDYLWY T VNIDS E FLK+GQ P LT++SAGH++QVF+NGQ  G  YG  + PKLT+S  VK+  G NKIS+LS++VGLPNVGTH+E WN GVLGPVTL GLNEG RD+SKQKWTY+IGLKGE L +H+VSGS
Sbjct:  437 NSLDETAFTKDGLVEQLSMTWDKSDYLWYTTYVNIDSGEQFLKSGQWPQLTVYSAGHSVQVFVNGQYFGNAYGGYDGPKLTYSGYVKMWQGSNKISILSSAVGLPNVGTHYETWNIGVLGPVTLSGLNEGKRDLSKQKWTYQIGLKGEKLGVHSVSGS 594          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL4_ORYSJ (Beta-galactosidase 4 OS=Oryza sativa subsp. japonica GN=Os02g0219200 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.093e-54
Identity = 99/158 (62.66%), Postives = 126/158 (79.75%), Query Frame = 3
Query:    9 SSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 482
            +S  D+ FTKDGL EQ+ +T D SDYLWY T VNI +N+  L++GQ P LT++SAGH++QVF+NG+  G+VYG  +NPKLT++  VK+  G NKIS+LS++VGLPNVG HFE WN GVLGPVTL  LN GT+D+S QKWTY++GLKGE L LHTV+GS
Sbjct:  453 NSLSDSAFTKDGLVEQLSMTWDKSDYLWYTTYVNIGTND--LRSGQSPQLTVYSAGHSMQVFVNGKSYGSVYGGYDNPKLTYNGRVKMWQGSNKISILSSAVGLPNVGNHFENWNVGVLGPVTLSSLNGGTKDLSHQKWTYQVGLKGETLGLHTVTGS 608          
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Match: BGAL4_ORYSI (Beta-galactosidase 4 OS=Oryza sativa subsp. indica GN=OsI_006270 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.093e-54
Identity = 99/158 (62.66%), Postives = 126/158 (79.75%), Query Frame = 3
Query:    9 SSTDDNTFTKDGLWEQVYLTADASDYLWYMTDVNIDSNEGFLKNGQDPLLTIWSAGHALQVFINGQLSGTVYGSLENPKLTFSKNVKLRAGVNKISLLSTSVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDISKQKWTYKIGLKGEALSLHTVSGS 482
            +S  D+ FTKDGL EQ+ +T D SDYLWY T VNI +N+  L++GQ P LT++SAGH++QVF+NG+  G+VYG  +NPKLT++  VK+  G NKIS+LS++VGLPNVG HFE WN GVLGPVTL  LN GT+D+S QKWTY++GLKGE L LHTV+GS
Sbjct:  453 NSLSDSAFTKDGLVEQLSMTWDKSDYLWYTTYVNIGTND--LRSGQSPQLTVYSAGHSMQVFVNGKSYGSVYGGYDNPKLTYNGRVKMWQGSNKISILSSAVGLPNVGNHFENWNVGVLGPVTLSSLNGGTKDLSHQKWTYQVGLKGETLGLHTVTGS 608          
The following BLAST results are available for this feature:
BLAST of BQ623788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
BGAL_MALDO3.112e-6674.38Beta-galactosidase OS=Malus domestica PE=1 SV=1[more]
BGAL_SOLLC2.913e-6472.96Beta-galactosidase OS=Solanum lycopersicum PE=1 SV... [more]
BGAL1_ARATH1.954e-6070.78Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BG... [more]
BGAL4_ARATH2.160e-5967.95Beta-galactosidase 4 OS=Arabidopsis thaliana GN=BG... [more]
BGAL_ASPOF3.685e-5971.61Beta-galactosidase OS=Asparagus officinalis PE=2 S... [more]
BGAL2_ARATH3.685e-5965.19Beta-galactosidase 2 OS=Arabidopsis thaliana GN=BG... [more]
BGA12_ARATH2.389e-5865.82Beta-galactosidase 12 OS=Arabidopsis thaliana GN=B... [more]
BGAL9_ORYSJ6.950e-5867.09Beta-galactosidase 9 OS=Oryza sativa subsp. japoni... [more]
BGAL4_ORYSJ2.093e-5462.66Beta-galactosidase 4 OS=Oryza sativa subsp. japoni... [more]
BGAL4_ORYSI2.093e-5462.66Beta-galactosidase 4 OS=Oryza sativa subsp. indica... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00879 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00879 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623788 ID=BQ623788; Name=BQ623788; organism=Citrus sinensis; type=EST; length=482bp
GAACTGCTTCTTCTACTGACGATAATACATTTACAAAAGATGGGTTATGG
GAACAAGTATATCTTACTGCAGATGCTTCAGATTATTTGTGGTACATGAC
AGATGTAAATATAGACTCCAACGAAGGATTTCTGAAGAATGGACAAGATC
CCCTTCTTACCATTTGGTCAGCCGGCCATGCCCTGCAGGTTTTCATTAAT
GGTCAACTATCAGGAACTGTTTATGGTTCATTAGAGAACCCTAAATTGAC
ATTCAGTAAGAATGTGAAACTGAGAGCTGGTGTTAATAAGATTTCTCTTC
TAAGTACTTCTGTAGGCCTTCCGAATGTGGGCACACACTTTGAGAAATGG
AATGCTGGGGTTCTTGGGCCAGTAACTTTGAAGGGTCTAAATGAGGGGAC
GAGAGACATATCTAAGCAAAAGTGGACTTACAAGATTGGTCTAAAAGGTG
AGGCCTTAAGCCTTCATACTGTTAGTGGGAGT
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