BQ623790

Overview
NameBQ623790
Unique NameBQ623790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7005 contig Csv1_Contig7005:526..1172. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.107e-70
Identity = 126/139 (90.65%), Postives = 134/139 (96.40%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            R+KG GWGWAGVIWLYSI+FY+PLD+MKFAIRYILSGKAW NLL+NKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE  NLF EK+SYRELSEIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct:  814 RVKGCGWGWAGVIWLYSIIFYLPLDIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3)

HSP 1 Score: 251.136 bits (640), Expect = 3.555e-66
Identity = 119/139 (85.61%), Postives = 129/139 (92.81%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            RI+G GWGWAGVIWLYS + Y+PLDL+KF IRY+LSGKAWLNLLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQP E NN+F EK+SY ELS+IAEQAKRRAEV RLRE++TLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct:  811 RIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA2_ARATH (ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 6.704e-65
Identity = 120/139 (86.33%), Postives = 127/139 (91.37%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            +I+G+GWGWAGVIWLYSIV Y PLD+ KFAIRYILSGKAWLNL ENKTAFT KKDYGKEEREAQWALAQRTLHGLQP E  N+FPEK SYRELSEIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+T   HYTV
Sbjct:  811 KIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVNIFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 948          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA1_ORYSJ (Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 8.756e-65
Identity = 120/141 (85.11%), Postives = 131/141 (92.91%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE--TNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            RIKG+GWGWAGVIWLYSIVFY PLD+ KF IR++LSG+AW NLLENK AFTTKKDYG+EEREAQWA AQRTLHGLQPPE  +N LF +KSSYRELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTIQQ+YTV
Sbjct:  811 RIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA9_ARATH (ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.826e-62
Identity = 111/139 (79.86%), Postives = 129/139 (92.81%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            RI+G+GWGWAGVIWLYSIVFY+PLD++KF IRY LSG+AW N++ENKTAFT+KKDYGK EREAQWA AQRTLHGLQP +T+++F +KS+YRELSEIA+QAKRRAEVARLRE HTLKGHVESVVK KGLDI+ IQQHYT+
Sbjct:  816 RIRGIGWGWAGVIWLYSIVFYIPLDILKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA1_ARATH (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 5.312e-62
Identity = 112/139 (80.58%), Postives = 123/139 (88.49%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            ++KG+GWGWAGVIW+YSIV Y P D++KFAIRYILSGKAW +L +N+TAFTTKKDYG  EREAQWA AQRTLHGLQP E  N+FPEK SYRELSEIAEQAKRRAE+ARLRELHTLKGHVESV KLKGLDIDT   HYTV
Sbjct:  811 KVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRYILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.497e-61
Identity = 114/141 (80.85%), Postives = 129/141 (91.49%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE--TNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            RIKG+GWGWAGVIWL+SIVFY PLD+ KF IR++LSG+AW NLL+NKTAFTTK++YGK EREAQWA AQRTLHGLQ PE  ++ LF +KSSYRELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTI Q+YTV
Sbjct:  811 RIKGIGWGWAGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA3_ARATH (ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 8.481e-60
Identity = 111/139 (79.86%), Postives = 124/139 (89.21%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            RIKG+GWGWAGVIWLYSIVFY PLD+MKFAIRYIL+G AW N+++N+TAFTTK++YG EEREAQWA AQRTLHGLQ  ET N+ PE+  YRELSEIA QAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+T   HYTV
Sbjct:  812 RIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGYRELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-AGHYTV 949          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA6_ARATH (ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.468e-59
Identity = 107/139 (76.98%), Postives = 124/139 (89.21%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            RIKG GWGW GVIW+YSIV Y+PLD++KF  RY LSGKAW N++EN+TAFTTKKDYG+ EREAQWALAQRTLHGL+PPE  ++F + ++Y ELSEIAEQAK+RAEVARLRE+HTLKGHVESVVKLKGLDID + QHYTV
Sbjct:  813 RIKGCGWGWCGVIWIYSIVTYIPLDILKFITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPE--SMFEDTATYTELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA8_ARATH (ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 6.720e-57
Identity = 109/139 (78.42%), Postives = 120/139 (86.33%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            RI G GWGWAG IW+YSI+ Y+PLD++KF IRY L+GKAW N++  KTAFTTKKDYGK EREAQWALAQRTLHGL PPE   +F +  +  ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct:  814 RIVGCGWGWAGGIWVYSIITYIPLDILKFIIRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA--MFNDNKN--ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948          
The following BLAST results are available for this feature:
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PMA4_NICPL3.107e-7090.65Plasma membrane ATPase 4 OS=Nicotiana plumbaginifo... [more]
PMA5_ARATH3.555e-6685.61ATPase 5, plasma membrane-type OS=Arabidopsis thal... [more]
PMA2_ARATH6.704e-6586.33ATPase 2, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ORYSJ8.756e-6585.11Plasma membrane ATPase OS=Oryza sativa subsp. japo... [more]
PMA9_ARATH1.826e-6279.86ATPase 9, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ARATH5.312e-6280.58ATPase 1, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_WHEAT4.497e-6180.85Plasma membrane ATPase OS=Triticum aestivum GN=ha1... [more]
PMA3_ARATH8.481e-6079.86ATPase 3, plasma membrane-type OS=Arabidopsis thal... [more]
PMA6_ARATH2.468e-5976.98ATPase 6, plasma membrane-type OS=Arabidopsis thal... [more]
PMA8_ARATH6.720e-5778.42ATPase 8, plasma membrane-type OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00881 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00881 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623790 ID=BQ623790; Name=BQ623790; organism=Citrus sinensis; type=EST; length=648bp
CAAGAATAAAGGGTGTTGGCTGGGGATGGGCCGGTGTCATTTGGCTTTAC
AGTATTGTCTTCTATGTCCCACTTGACCTAATGAAGTTTGCCATCCGTTA
CATCTTAAGTGGAAAGGCTTGGCTCAACTTGCTCGAAAACAAGACTGCAT
TCACCACCAAGAAAGACTATGGTAAAGAAGAGAGAGAAGCTCAATGGGCT
CTCGCGCAAAGAACCCTTCATGGGCTTCAACCACCAGAAACGAATAATCT
CTTCCCTGAAAAGAGTAGCTACAGAGAATTGTCTGAGATTGCTGAGCAAG
CCAAGAGACGAGCCGAAGTTGCAAGGCTTCGGGAGCTTCACACACTCAAA
GGACATGTCGAGTCAGTGGTGAAGCTGAAGGGCTTGGACATTGATACGAT
CCAGCAGCATTATACAGTGTAAAAAGCCAGAAGGAAAAAACATTACTCGC
GGAAAAAGGGCCAGTTCAATGACGGCCTTATTCGAGAGAAGGTGTCTCAA
TGATAAAAGGGCTTCTAGATAGAGATGAGAGCTTGTTTTCGCTATAAGTC
TCCTAGTGTTTACTTTTTTTTTTTTTTTTTATCAAAATGTTTTCCAATGC
CGGAAGAATGGATTGTGTATTTCAGCGCCGGAAAGAAAGGACTGGATT
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