BQ623792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623792 vs. ExPASy Swiss-Prot
Match: PSBW_SPIOL (Photosystem II reaction center W protein, chloroplastic OS=Spinacia oleracea GN=psbW PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.161e-27 Identity = 66/124 (53.23%), Postives = 75/124 (60.48%), Query Frame = 2 Query: 35 MAAITASVGTSSITPSVLVHKPSIVASSSPVLGLPAKAVKGKVRCSMEEKPSKQESKT--NVGXXXXXXXXXXXXXXXXXXXXLVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWALYIPYA 400 MA ITAS S + + LVH + SSSP+LGLP+ + KV CS+E KPS E+ T N LVD+RMSTEGTGLPFGLSNNLLGWIL GVFGLIWALY YA Sbjct: 1 MATITASSSASLVARASLVHNSRVGVSSSPILGLPSMTKRSKVTCSIENKPSTTETTTTTNKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYA 124
BLAST of BQ623792 vs. ExPASy Swiss-Prot
Match: PSBW_ARATH (Photosystem II reaction center W protein, chloroplastic OS=Arabidopsis thaliana GN=PSBW PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.286e-20 Identity = 63/123 (51.22%), Postives = 73/123 (59.35%), Query Frame = 2 Query: 35 MAAITASVGTSSITPSVLVHKPSIVASSSPVLGLPAKAVK-GKVRCSMEEKPSKQESKTNVGXXXXXXXXXXXXXXXXXXXX-LVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWALYIPY 397 MA+ TAS T S L+ KP+ VA S+PVLGLP K G VRCSME +KQ + + +G LVD+RMSTEGTGLPFGLSNNLLGWIL GVFGLIW + Y Sbjct: 1 MASFTASASTVSAARPALLLKPT-VAISAPVLGLPPMGKKKGGVRCSME---TKQGNVSVMGAGVSAAATAALTAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVY 119
BLAST of BQ623792 vs. ExPASy Swiss-Prot
Match: PSBW_ORYSJ (Photosystem II reaction center W protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSBW PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.928e-14 Identity = 50/123 (40.65%), Postives = 62/123 (50.41%), Query Frame = 2 Query: 35 MAAITASVGTSSITPSVLVHKPSIVASSSPVLGLPAKAVKG--KVRCSMEEKPSKQESKTNVGXXXXXXXXXXXXXXXXXXXXLVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWALYIPY 397 MA ++A+ TS + +VL LGLP + +VRC+ SK+ + LVD+RMSTEGTGL GLSNNLLGWILLGVFGLIW+LY Y Sbjct: 1 MATVSAAAATSVVARAVLAGP----------LGLPQMRARRSERVRCNY----SKEAATPAAAVKGAGASLLAMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIY 109 The following BLAST results are available for this feature:
BLAST of BQ623792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623792 ID=BQ623792; Name=BQ623792; organism=Citrus sinensis; type=EST; length=560bpback to top |