BQ623798

Overview
NameBQ623798
Unique NameBQ623798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig39 contig Csv1_Contig39:1..495. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of BQ623798 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.517e-15
Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 3 
Query:   12 PSPLDVHFSRALSRHGLE----RKRMCRRPRLAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 209
            P  L   F RAL +  L+    +     + R AFL RCKANSEATLGTYKGDA LGEGA+ESLHVKDYKY
Sbjct:  289 PWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358
[Close]
BLAST of BQ623798 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 3 
Query:    3 GHFPSPLDVHFSRALSRHGLE----RKRMCRRPRLAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 209
            G  P  L   F RAL +  L+    ++   +  + A L R KANSEATLGTYKG++QLGEGA+ESLHVKDYKY
Sbjct:  287 GKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359
[Close]
BLAST of BQ623798 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 3 
Query:    3 GHFPSPLDVHFSRALSRHGLE----RKRMCRRPRLAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 209
            G  P  L   F RAL +  L+    +    +  + A L R KANSEATLGTYKG + LG GA+ESLHVKDYKY
Sbjct:  287 GKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359
The following BLAST results are available for this feature:
BLAST of BQ623798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ALF_ORYSJ3.517e-1561.43Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR5.615e-1354.79Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA5.256e-1152.05Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00889 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00889 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623798 ID=BQ623798; Name=BQ623798; organism=Citrus sinensis; type=EST; length=496bp
ATGGTCACTTTCCTTCTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCA
AGGCATGGGCTGGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTTGCTTT
CCTTGTCAGGTGCAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGG
GTGATGCCCAGCTTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGAC
TACAAATACTAAGCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTT
TATGAGAGTAAATGGCGGTATGAACATTAGGTTGGCCCATTCTCATTCAT
AGTTTTAGAGCTTTTTCATATTTAGGTGGAGCAATAAAAAGCTTGGGAAC
TTCGGTTTGAGTGGTTTTGATCAAAACTAAACTGAAAACTGTTTATGCTT
TTGTTTTTGTTTTTCTTTTTTTTTCCTTTCCCCTAATGGCACTAAATTTC
TGTGATTTTGTCACATAATTGATAATGTTTTCTTGTGCTACGAAAA
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