BQ623842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623842 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.989e-31 Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 3 Query: 90 KLLISIRGEFARLNFPHLKHHGAHVTGEFGDYKPLHASVDAKLQAICQNLALNNNVXXXXXXXXXXXXEAETKPVLLPATAANIKVENTSATSLSSPTPDHSLSDAGSSSPESDVSFLDFND-TKWETEMDAFGLEKYPSVEIDWEAI 530 K +RG+FARLNFP+L+H+G+H+ G+FG+YKPLH+SVDAKL+AIC+++A + K V P + +K E S + SP SSP SD++F D + +W + F LEKYPS EIDW++I Sbjct: 193 KAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQK-----QDKSTKSSKKREKKVSSPDLSEKVKAEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADPEEPPQWN---ETFSLEKYPSYEIDWDSI 332 HSP 2 Score: 44.2838 bits (103), Expect = 1.989e-31 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = 2 Query: 2 VAEIRLPKNRTRLWLGTFDT 61 VAEIRLP+NRTRLWLGTFDT Sbjct: 164 VAEIRLPRNRTRLWLGTFDT 183
BLAST of BQ623842 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.531e-24 Identity = 57/151 (37.75%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 90 KLLISIRGEFARLNFPHLKHHGAHVTGEFGDYKPLHASVDAKLQAICQNLALNNNVXXXXXXXXXXXXEAETKPVLLPATAANIKVENTSATSLSSPTPDHSLSDAGSSSPESDVSFLDFNDTKWETEMDAFGLEKYPSVEIDWEAIRKLS 542 K +RG+FARLNFP L+H+ +Y+PL +SVDAKL+AICQNLA + T V LP E +++ SSP S GSSSP S+++F D + + + + LEKYPS EIDW++I + S Sbjct: 124 KAAYKLRGDFARLNFPDLRHND--------EYQPLQSSVDAKLEAICQNLAETTQKQVRSTKKSSSRKRSSTVAVKLP--------EEDYSSAGSSPLLTESYGSGGSSSPLSELTFGD-TEEEIQPPWNENALEKYPSYEIDWDSILQCS 257 HSP 2 Score: 44.2838 bits (103), Expect = 2.531e-24 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = 2 Query: 2 VAEIRLPKNRTRLWLGTFDT 61 VAEIRLP+NRTRLWLGTFDT Sbjct: 95 VAEIRLPRNRTRLWLGTFDT 114
BLAST of BQ623842 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.733e-20 Identity = 64/154 (41.56%), Postives = 89/154 (57.79%), Query Frame = 3 Query: 105 IRGEFARLNFPHLKHHGAHVTGEFGDYKPLHASVDAKLQAICQNLALNNNVXXXXXXXXXXXXEAETKPVLLPATAANI---KVENTSATSLSSPTPDHSLSDAG---SSSPESDVS-FLDFNDTKWETEMDAFGLEKYPSVEIDWEAIRKLSE 545 +RGEFARLNFP +H + G + PLH+SVDAKLQ ICQ+L +T+ + LP + + K E + + ++S SD SSSPES ++ FLDF+D+ ++ E+ +FGLEK+PSVEIDW+AI KLSE Sbjct: 139 LRGEFARLNFPQFRHEDGYYGGG-SCFNPLHSSVDAKLQEICQSLR-------------------KTEDIDLPCSETELFPPKTEYQESEYGFLRSDENSFSDESHVESSSPESGITTFLDFSDSGFD-EIGSFGLEKFPSVEIDWDAISKLSE 271
BLAST of BQ623842 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.898e-16 Identity = 57/153 (37.25%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 105 IRGEFARLNFPHLKHHGAHVTGEFGDYKPLHASVDAKLQAICQNLALNN---NVXXXXXXXXXXXXEAETKPVLLPATAANIKVENTSATSLSSPTPDHS----LSDAGSSSPESDVSFLDFNDTKWETEMDAFGLEKYPSVEIDWEAIRKLS 542 +RG+ A+LNFP+L H D PL +SVD KLQAIC++L +V +T+ L A K E+ LS+ +P L ++ + SD +FLDF+DT++E E+ +FGL K+PSVEIDW+AI KL+ Sbjct: 117 LRGDIAKLNFPNLIHE---------DMNPLPSSVDTKLQAICKSLRKTEEICSVSDQTKEYSVYSVSDKTELFLPKAELFLPKREHLETNELSNESPRSDETSLLDESQAEYSSSDKTFLDFSDTEFE-EIGSFGLRKFPSVEIDWDAISKLA 259 The following BLAST results are available for this feature:
BLAST of BQ623842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623842 ID=BQ623842; Name=BQ623842; organism=Citrus sinensis; type=EST; length=659bpback to top |