BQ623846

Overview
NameBQ623846
Unique NameBQ623846
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length414
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11466 contig Csv1_Contig11466:501..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of BQ623846 vs. ExPASy Swiss-Prot
Match: ZDHC1_ARATH (Probable S-acyltransferase At1g69420 OS=Arabidopsis thaliana GN=At1g69420 PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 2.028e-32
Identity = 74/135 (54.81%), Postives = 81/135 (60.00%), Query Frame = 3 
Query:    3 ILLIKKGLTTYDYIIALRXXXXXXXXXXXXXSPQMXXXXXXXXXXXXXXXXXXHRGAWCTPPRLFLEDQFDVVPPETGSVSSLGKKTVGEEPIKKKNPAVKISPWTLARLNXXXXXXXXXXXX*TSKILQPVVKR 407
            ILLIKKG++TYDYI+ALR             SPQM                  HRGAWCTPPRLFLEDQFDVVPPE  SVSS GKK+V EE +KKK   VKISPWTLARLN              SKI+QPV +R
Sbjct:  283 ILLIKKGISTYDYIVALREQEQELEAGGGQQSPQMSMISSFTGLSSASSFNTFHRGAWCTPPRLFLEDQFDVVPPENASVSSYGKKSVVEERVKKKPQPVKISPWTLARLNAEEVSKAAAEARKKSKIIQPVARR 417
The following BLAST results are available for this feature:
BLAST of BQ623846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ZDHC1_ARATH2.028e-3254.81Probable S-acyltransferase At1g69420 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00926 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00926 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623846 ID=BQ623846; Name=BQ623846; organism=Citrus sinensis; type=EST; length=414bp
ACATCCTCCTAATAAAAAAGGGACTTACCACATATGATTACATTATAGCT
CTAAGGGAGCAGGAACAAGAGCAACAAGGAGTTGGAGGCCAGCAGAGTCC
ACAAATGTCAATTGCCAGCTCGCTTACTGGATTAAGCAGTGCAAGCTCTT
TTTCTACTTTTCACCGCGGGGCATGGTGTACACCCCCACGCTTATTTCTT
GAAGATCAGTTTGATGTAGTTCCTCCGGAGACTGGGTCTGTAAGTTCATT
AGGAAAGAAGACGGTGGGAGAGGAACCAATTAAGAAAAAGAACCCAGCAG
TGAAGATTAGTCCATGGACATTGGCTCGGTTGAATGCAGAGGAGATTTCA
TAGGCTGCTGCAGAGGCATGATAGACATCCAAAATCCTGCAGCCCGTGGT
TAAACGGGGAGCCC
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