BQ623849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL131_ARATH (60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 6.983e-84 Identity = 148/189 (78.31%), Postives = 162/189 (85.71%), Query Frame = 2 Query: 38 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANERH 604 MKHNNVIPNGHFKKHWQNYVKTWFNQP IFPRPT+GPLRPVVHGQTLKYNMK+R G+GFTLEELKAAGIPKKLAPTIGI+VDHRRKNRSLEGLQ+NVQRLKTYK KLV+FPRRARK KAGDS PEELA ATQVQG Y+PI EKPT++LVK T +MKSFKA+DK+R+ER N+RH Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRH 189
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL132_BRANA (60S ribosomal protein L13-2 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 5.004e-82 Identity = 148/189 (78.31%), Postives = 158/189 (83.60%), Query Frame = 2 Query: 38 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANERH 604 MKHNNVIPNGHFKKHWQNYVKTWFNQP IFPRPTAGPLRPVVHGQTLKYNMK+R G+GFTLEELKAAGIPKKLAPTIGIS+DHRRKNRSLEGLQSNVQRLKTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK ++LVK T +MKS AYDK+R+ER N+RH Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELVKLTSEMKSVNAYDKIRLERTNKRH 189
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL131_BRANA (60S ribosomal protein L13-1 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 1.902e-81 Identity = 147/189 (77.78%), Postives = 158/189 (83.60%), Query Frame = 2 Query: 38 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANERH 604 MKHNNVIPNGHFKKHWQNYVKTWFNQP IFPRPTAGPLRPVVHGQTLKYNMK+R G+GFTLEELK+AGIPKKLAPTIGI+VDHRRKNRSLEGLQSNVQRLKTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK +LVK T +MKS KA+DK+R+ER N+RH Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKSAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELVKLTTEMKSVKAFDKIRLERTNKRH 189
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL133_ARATH (60S ribosomal protein L13-3 OS=Arabidopsis thaliana GN=RPL13D PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.233e-80 Identity = 145/189 (76.72%), Postives = 158/189 (83.60%), Query Frame = 2 Query: 38 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANERH 604 MKHNNVIP+ HF+KHWQNYVKTWFNQP IFPRPT+GPLRPVVHGQTLKYNMK+RAG+GFTLEELK AGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRR+R+ KAGDS PEELA ATQVQG YMPI K ++LVK T D+K+FKAYDK+R+ER N RH Sbjct: 1 MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARH 189
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL132_ARATH (Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana GN=RPL13C PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.117e-73 Identity = 137/189 (72.49%), Postives = 150/189 (79.37%), Query Frame = 2 Query: 38 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANERH 604 MKHNNVIPNGHFKK W+NYVKT FNQP IFPRPTAGP+RPVVH QTL YNMK+RAG+GFTLEELKAAGIPKKLAPTIGISVDH RKNRSLEG Q+NVQRLKTYKAKLV+FPR AR K GDSA +ELA ATQVQ +MPI E PT++LVK T DMK F AYDK+R+E N+RH Sbjct: 1 MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRH 189
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_TOBAC (60S ribosomal protein L13 OS=Nicotiana tabacum GN=RPL13 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.203e-63 Identity = 121/194 (62.37%), Postives = 139/194 (71.65%), Query Frame = 2 Query: 62 NGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANERHFWCQVEEGCRGLK 643 NGHFKKHWQNYVKTWFNQP I PRPTAG LRP+VHGQTLKYNMK+R+GRGF+LEELKAAGIPKKLAPTIGI+VDHRR+NRSLEGLQ+NVQRL+ + +LVVFPRRA + + P TATQV G YMPI EK + L K + MKSF AY KLR+ER NERH +++ K Sbjct: 5 NGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKISPRPTAGTLRPIVHGQTLKYNMKVRSGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLEDLQGQLVVFPRRASRSRLVILPPRNCLTATQVHGAYMPIEREKHQLILSKVLKKMKSFNAYAKLRVERTNERHIGARMKRAAEAEK 198
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_CHLSW (60S ribosomal protein L13 OS=Chlamydomonas sp. (strain W80) GN=RPL13 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.895e-55 Identity = 105/188 (55.85%), Postives = 131/188 (69.68%), Query Frame = 2 Query: 38 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANER 601 ++ N+++PNGHF K WQ +VKTWFNQP FPRP AG L+P+V QT+KYN K R GRGFTLEELK AGIP K APT+GI+VDHRRKNRSLE LQ+NVQRLKTY+A LV+FPR +K KA +++ + + A+Q +G +P+ KP ++LVK T DMK Y KLRIER N R Sbjct: 2 VRGNDMLPNGHFHKKWQFHVKTWFNQPARKQRRRNARAEKAKATFPRPVAGSLKPIVRCQTVKYNTKQRLGRGFTLEELKEAGIPAKFAPTVGIAVDHRRKNRSLETLQANVQRLKTYRASLVIFPRNMKKPKAFEASAADCSAASQAKGELLPLKGTKPALELVKITADMKEGSQYGKLRIERVNAR 189
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_DANRE (60S ribosomal protein L13 OS=Danio rerio GN=rpl13 PE=2 SV=3) HSP 1 Score: 197.208 bits (500), Expect = 6.597e-50 Identity = 104/187 (55.61%), Postives = 124/187 (66.31%), Query Frame = 2 Query: 47 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANERHF 607 N +I N HF K WQ V+TWFNQP I PRP +GPLRPVV T++Y+ K+RAGRGFTLEELKAAGI KK+A TIGISVD RR+NRS E LQ+NVQRLK Y+ KL++FPR+A K K GDS EEL ATQ+ GP MPI ++D K+FKA+ LR+ RAN R F Sbjct: 6 NGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQLTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMARANARLF 192
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_DROME (60S ribosomal protein L13 OS=Drosophila melanogaster GN=RpL13 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.244e-48 Identity = 98/188 (52.13%), Postives = 126/188 (67.02%), Query Frame = 2 Query: 41 KHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKP-TVDLVKGTQDMKSFKAYDKLRIERANER 601 K NN+IPN H+ K WQ +VKTWFNQP +FPRP +G LRPVV T++Y+ KLRAGRGFTLEELK AGI A TIGI+VD RRKN+SLE Q N+QRLK Y++KL++FP +K +AG+S+ EE ATQ++GP +PI E+P V+ + T+D K FKA+ LR R + R Sbjct: 3 KGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDAR 190
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_ICTPU (60S ribosomal protein L13 OS=Ictalurus punctatus GN=rpl13 PE=2 SV=3) HSP 1 Score: 188.348 bits (477), Expect = 3.064e-47 Identity = 98/187 (52.41%), Postives = 120/187 (64.17%), Query Frame = 2 Query: 47 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANERHF 607 N +I N HF K WQ V+TWFNQP I PRP AGPLRP+V T++YN K+RAGRGFTLEELKAAGI K++A TIGI+VD RR+NRS E L NVQRLK Y++KL++FPR+ K GDS EE+ ATQ+ GP MPI + T++ K F A+ LR+ RAN R F Sbjct: 6 NGMILNPHFHKDWQKRVRTWFNQPARKLRRRKARQAKARRIAPRPVAGPLRPIVRCPTVRYNTKVRAGRGFTLEELKAAGINKRVARTIGIAVDPRRRNRSTESLHVNVQRLKVYRSKLILFPRKVSAPKKGDSTEEEVKMATQLTGPVMPIKIVHKKEKARMITEEEKKFNAFANLRMARANARLF 192 The following BLAST results are available for this feature:
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623849 ID=BQ623849; Name=BQ623849; organism=Citrus sinensis; type=EST; length=678bpback to top |