BQ623853

Overview
NameBQ623853
Unique NameBQ623853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length421
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9820 contig Csv1_Contig9820:434..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_GEOSW (Methylthioribose kinase OS=Geobacillus sp. (strain WCH70) GN=mtnK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.550e-19
Identity = 56/131 (42.75%), Postives = 83/131 (63.36%), Query Frame = 3
Query:    6 PDHVPEVYHFDRTMSLIGMRYLEPPHI-ILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDR---DAEAVREDNTLKLEEAGMK 386
            P +VP+VY+ D ++++  M  L   H+ I RKGLI G  YPLL++H+ EF+AKT FYTS  +    + K+ +A+   N ELC++TE +VF+DP+    FNH T+ + D    D EA+  D+ L LE A +K
Sbjct:   96 PQYVPKVYYSDESLAITVMEDLS--HLQIARKGLIEGKTYPLLSQHIGEFIAKTSFYTS-DFGMNQQEKKQLAQSFVNPELCKITEDLVFTDPF----FNHETNNFEDELRDDVEALWNDDKLHLEAAKLK 219          
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_GEOKA (Methylthioribose kinase OS=Geobacillus kaustophilus GN=mtnK PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18
Identity = 54/130 (41.54%), Postives = 81/130 (62.31%), Query Frame = 3
Query:    6 PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDR---DAEAVREDNTLKLEEAGMK 386
            P +VP+VY+ D ++++  M  L    I  RKGLI G  YPLL++H+ EF+AKT FYTS  +    + K+ +A+   N ELC++TE +VF+DP+    F+H T+ + D    D EA+  D+ L LE A +K
Sbjct:   96 PQYVPKVYYSDESLAITVMEDLSRLQIA-RKGLIEGKTYPLLSQHIGEFVAKTAFYTS-DFGMNQQEKKKLAQSFVNPELCKITEDLVFTDPF----FDHETNNFEDELRPDVEALWRDDRLHLEAAKLK 219          
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_ENTS8 (Methylthioribose kinase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mtnK PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 49/128 (38.28%), Postives = 76/128 (59.38%), Query Frame = 3
Query:    3 CPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDRDAEAVREDNTLKLEEAGMK 386
            CP H  +++H+D T++++ M  L   H I R  LI G+ YP  A  + E++A+TLF+TS  Y      K  VA F  N E+C +TE + F+DPY+V + N++ +  L+ D  A+R+D  LK   A +K
Sbjct:   91 CPAHTVKIHHYDPTLAVMVMEDLSD-HRIWRGELIKGVHYPQAARQLGEYLAQTLFHTSDFYLHPHAKKAEVARFI-NPEMCEITEDLFFNDPYQVHERNNYPAE-LEADVAALRDDAALKCAVAALK 215          
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_GEOTN (Methylthioribose kinase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=mtnK PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.387e-17
Identity = 53/133 (39.85%), Postives = 81/133 (60.90%), Query Frame = 3
Query:    6 PDHVPEVYHFDRTMSLIGMR---YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDR---DAEAVREDNTLKLEEAGMK 386
            P +VP+VY+ D ++++  M    YL+    I RKGLI G  YPLL+ H+ EF+AKT FYTS  +    + K+ +A+   N ELC++TE +VF+DP+    F+H ++ + D    D E +  D+ L LE A +K
Sbjct:   96 PQYVPKVYYSDESLAITVMEDLSYLQ----IARKGLIEGKTYPLLSRHIGEFIAKTAFYTS-DFGMNQQEKKKLAQSFVNPELCKITEDLVFTDPF----FDHDSNNFEDELHLDVETLWNDDRLHLEAAKLK 219          
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_CITK8 (Methylthioribose kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mtnK PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 6.945e-17
Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 3
Query:    3 CPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDRDAEAVREDNTLKLEEAGMK 386
            CP H  +++HFD  ++++ M  L   H I R  LI G  YP  A  + E++A+TLF+TS  Y    + K  VA F  N E+C +TE + F+DPY++ + N + +  ++ D  A+R D  LKL  A +K
Sbjct:   91 CPQHTVKIHHFDPELAVMVMEDLSD-HNIWRGELIKGAWYPQAARQLGEYLAQTLFHTSDFYLHPHDKKAQVATFI-NPEMCEITEDLFFNDPYQIHERNSYPAE-IEGDVAALRSDAQLKLAVAALK 215          
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_KLEP3 (Methylthioribose kinase OS=Klebsiella pneumoniae (strain 342) GN=mtnK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.639e-16
Identity = 46/127 (36.22%), Postives = 75/127 (59.06%), Query Frame = 3
Query:    6 PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDRDAEAVREDNTLKLEEAGMK 386
            P H  +++HFD  ++++ M  L   H I R  LIA + YP  A  + +++A+ LF+TS  Y    E K  VA+F  N  +C +TE + F+DPY++ + N++ +  L+ D  A+R+D  LKL  A +K
Sbjct:   92 PQHTVKIHHFDPELAVMVMEDLSD-HRIWRGELIANVYYPQAARQLGDYLAQVLFHTSDFYLHPHEKKAQVAQF-SNPAMCEITEDLFFNDPYQIHERNNYPAE-LETDVAALRDDAQLKLAVAALK 215          
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_KLEPN (Methylthioribose kinase OS=Klebsiella pneumoniae GN=mtnK PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.447e-16
Identity = 46/127 (36.22%), Postives = 75/127 (59.06%), Query Frame = 3
Query:    6 PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDRDAEAVREDNTLKLEEAGMK 386
            P H  +++HFD  ++++ M  L   H I R  LIA + YP  A  + +++A+ LF+TS  Y    E K  VA+F  N  +C +TE + F+DPY++ + N++ +  L+ D  A+R+D  LKL  A +K
Sbjct:   92 PQHTVKIHHFDPELAVMVMEDLSD-HRIWRGELIANVYYPQAARQLGDYLAQVLFHTSDFYLHPHEKKAQVAQFI-NPAMCEITEDLFFNDPYQIHERNNYPAE-LEADVAALRDDAQLKLAVAALK 215          
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_KLEP7 (Methylthioribose kinase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mtnK PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.447e-16
Identity = 46/127 (36.22%), Postives = 75/127 (59.06%), Query Frame = 3
Query:    6 PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDRDAEAVREDNTLKLEEAGMK 386
            P H  +++HFD  ++++ M  L   H I R  LIA + YP  A  + +++A+ LF+TS  Y    E K  VA+F  N  +C +TE + F+DPY++ + N++ +  L+ D  A+R+D  LKL  A +K
Sbjct:   92 PQHTVKIHHFDPELAVMVMEDLSD-HRIWRGELIANVYYPQAARQLGDYLAQVLFHTSDFYLHPHEKKAQVAQFI-NPAMCEITEDLFFNDPYQIHERNNYPAE-LEADVAALRDDAQLKLAVAALK 215          
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_SERP5 (Methylthioribose kinase OS=Serratia proteamaculans (strain 568) GN=mtnK PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.502e-16
Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = 3
Query:    3 CPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDRDAEAVREDNTLKLEEAGMK 386
            CP H  +V H D  ++++    L   HI  R  L+ G  YPL A  ++E++A+TLF+TS  Y+T  E K  V+ F  N ELC++TE + F+DPY   + N +    L +  E +R D  L+L  AG+K
Sbjct:   91 CPRHTVKVLHHDAELAVMVQEDLSDHHI-WRSELVKGHYYPLAAGQLAEYLAQTLFHTSDFYQTAQEKKAEVSRF-SNPELCQITEDLFFTDPYIDHERNQFDPALLPQVLE-LRNDAALRLAVAGLK 215          
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Match: MTNK_ENT38 (Methylthioribose kinase OS=Enterobacter sp. (strain 638) GN=mtnK PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.880e-16
Identity = 44/127 (34.65%), Postives = 76/127 (59.84%), Query Frame = 3
Query:    6 PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRNVAEFCGNVELCRLTEQVVFSDPYKVSKFNHWTSPYLDRDAEAVREDNTLKLEEAGMK 386
            P H  +++H+D  ++++ M  L   H I R  LI+G+ YP  +  + E++A TLF+TS  Y      K  VA++  N E+C +TE + F+DPY++ + N++ +  L+ D  A+R D+ LK+  A +K
Sbjct:   92 PQHTVKIHHYDPELAVMVMEDLSS-HKIWRGELISGVYYPQASRQLGEYLAHTLFHTSDFYLHPHAKKAQVAKYI-NPEMCEITEDLFFNDPYQIHERNNYPAE-LEADVAALRSDDQLKIAVASLK 215          
The following BLAST results are available for this feature:
BLAST of BQ623853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
MTNK_GEOSW2.550e-1942.75Methylthioribose kinase OS=Geobacillus sp. (strain... [more]
MTNK_GEOKA1.266e-1841.54Methylthioribose kinase OS=Geobacillus kaustophilu... [more]
MTNK_ENTS86.282e-1838.28Methylthioribose kinase OS=Enterobacter sakazakii ... [more]
MTNK_GEOTN2.387e-1739.85Methylthioribose kinase OS=Geobacillus thermodenit... [more]
MTNK_CITK86.945e-1737.50Methylthioribose kinase OS=Citrobacter koseri (str... [more]
MTNK_KLEP32.639e-1636.22Methylthioribose kinase OS=Klebsiella pneumoniae (... [more]
MTNK_KLEPN3.447e-1636.22Methylthioribose kinase OS=Klebsiella pneumoniae G... [more]
MTNK_KLEP73.447e-1636.22Methylthioribose kinase OS=Klebsiella pneumoniae s... [more]
MTNK_SERP54.502e-1638.28Methylthioribose kinase OS=Serratia proteamaculans... [more]
MTNK_ENT385.880e-1634.65Methylthioribose kinase OS=Enterobacter sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00933 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00933 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623853 ID=BQ623853; Name=BQ623853; organism=Citrus sinensis; type=EST; length=421bp
TGTGTCCTGACCATGTTCCCGAAGTCTATCATTTTGACCGTACAATGTCT
TTGATTGGTATGCGGTACCTGGAGCCTCCTCATATTATCCTGAGAAAGGG
GTTGATTGCTGGAATAAAGTATCCATTACTTGCGGAACACATGTCAGAAT
TCATGGCAAAGACTCTTTTCTACACATCTCTTTTATATCGTACCACCACA
GAGCACAAACGTAATGTTGCTGAATTTTGTGGGAATGTGGAGCTATGCAG
GCTCACGGAGCAGGTTGTTTTCTCGGACCCCTACAAAGTATCTAAGTTTA
ACCATTGGACTTCTCCTTATCTTGATCGTGACGCTGAGGCTGTTCGGGAG
GATAATACATTAAAGCTGGAAGAAGCTGGGATGAAATCCATGTGCTGTGA
AAATAGCGCAGTCCCTGTTGC
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