BQ623855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 1.399e-57 Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 2 Query: 2 LFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 337 LFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDPWHNTIVQTL GN Sbjct: 141 LFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 1.399e-57 Identity = 103/110 (93.64%), Postives = 106/110 (96.36%), Query Frame = 2 Query: 2 LFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 331 LFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQT + Sbjct: 142 LFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 6.514e-47 Identity = 86/101 (85.15%), Postives = 93/101 (92.08%), Query Frame = 2 Query: 32 YVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 334 YVEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP E KEKELANGRLAMLAFLGF+VQHNV GKGPFENL QH++DPWHNTI+QT+SG Sbjct: 131 YVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAPL-ENKEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.322e-23 Identity = 58/116 (50.00%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 2 LFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 331 LFVIE +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 153 LFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.254e-23 Identity = 56/116 (48.28%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 2 LFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 331 LF++E +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 153 LFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.801e-19 Identity = 54/121 (44.63%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 2 LFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------PNEVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTL 328 LFV+E L + E RR+QD PGS+ KQY L + YPGG +FNPL F + E K KE+ NGRLAMLA LG+ +Q VTG GP++NLL H++DP +N ++ +L Sbjct: 155 LFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSL 270
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.852e-18 Identity = 54/121 (44.63%), Postives = 70/121 (57.85%), Query Frame = 2 Query: 2 LFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------PNEVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTL 328 LFV+E L + E RR+QD PGS+ KQY L YPGG FNPL F + E K KE+ NGRLAMLA LG+ +Q VTG GP++NLL H++DP +N ++ +L Sbjct: 157 LFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSL 272
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.034e-15 Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 2 Query: 116 PNEVGYPGGIFNPLNF----APTDEAKEKELANGRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 316 P + YPGG F+PL F A +E K KE+ NGRLAMLAF+GF VQ + G GP ENL H++DPWHN I Sbjct: 162 PEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.240e-13 Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 2 LFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF----APTDEAKEKELANGRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 316 + IEF+ +VE +R S+ +D K+Y PGG F+PL + A +E K KE+ NGRLA+LA +GF VQ + G GP ENL H++DPWHN I Sbjct: 142 ILAIEFLAIAFVEHQR--------SMEKDSEKKKY---------PGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.762e-13 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 2 Query: 131 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 334 +PGG F+PL A E K KE+ NGRLAM A LGF +Q VTG+GP ENL +H+SDP+ N ++ ++G Sbjct: 201 HPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAG 272 The following BLAST results are available for this feature:
BLAST of BQ623855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623855 ID=BQ623855; Name=BQ623855; organism=Citrus sinensis; type=EST; length=358bpback to top |