BQ623857

Overview
NameBQ623857
Unique NameBQ623857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length375
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:698..1071. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.876e-25
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            ERYRSW PDRQERF+ RW+ AL D RVTHE+RSIW+SYWSQADRSLGQKLAS LNVRPSI
Sbjct:  433 ERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492          
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.980e-25
Identity = 50/60 (83.33%), Postives = 57/60 (95.00%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            ERYRS++ DRQERF+NRWI AL DPRVTHE+RSIW+SYWSQAD+SLGQK+ASRLNVRPSI
Sbjct:  433 ERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492          
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.173e-24
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCD--PRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            ERYR+WAPDRQERFL RW++AL D  PR+THE+RSIWVSYWSQADRSLGQKLAS LN+RPSI
Sbjct:  433 ERYRTWAPDRQERFLRRWVEALSDTDPRITHEIRSIWVSYWSQADRSLGQKLASHLNMRPSI 494          
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.532e-24
Identity = 46/60 (76.67%), Postives = 56/60 (93.33%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            ER+RSWAPDRQ+RF+ RW+ AL DPRVTHE+RS+W+SYWSQADRSLGQK+AS LN+RP+I
Sbjct:  433 ERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI 492          
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.532e-24
Identity = 48/60 (80.00%), Postives = 56/60 (93.33%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            ERYRSWAPDRQERF+ RW+ AL DPRVTHE+RSIW SYWSQAD++LGQK+ASRLNVRP++
Sbjct:  433 ERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 1.532e-24
Identity = 47/60 (78.33%), Postives = 56/60 (93.33%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            +RYRSWAPDRQ+RF+ RW++ L +PR+THE+R IW+SYWSQADRSLGQKLASRLNVRPSI
Sbjct:  433 DRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLASRLNVRPSI 492          
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 3.413e-24
Identity = 48/60 (80.00%), Postives = 56/60 (93.33%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            ERYR++ P+RQERF+ RWI AL DPR+THE+RSIW+SYWSQAD+SLGQKLASRLNVRPSI
Sbjct:  433 ERYRTFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.413e-24
Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            ERYRSWA DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQAD+S+GQKLAS LNVRPSI
Sbjct:  433 ERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492          
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.457e-24
Identity = 47/60 (78.33%), Postives = 57/60 (95.00%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            ERYRS+ PDRQERF+ RW++AL DPR+T+E+RSIW++YWSQAD+SLGQKLASRLNVRPSI
Sbjct:  433 ERYRSFTPDRQERFIRRWVEALSDPRITYEIRSIWITYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.821e-24
Identity = 46/60 (76.67%), Postives = 54/60 (90.00%), Query Frame = 3
Query:    3 ERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 182
            ERYRSWAPDRQ+RF  RW+ AL DPRVTHE+RS+W+SYWSQADRSLGQK+AS L+ RP+I
Sbjct:  433 ERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492          
The following BLAST results are available for this feature:
BLAST of BQ623857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA1_CUCPE6.876e-2583.33Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA2_GOSHI8.980e-2583.33Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA_PEA1.173e-2482.26Catalase OS=Pisum sativum PE=2 SV=1[more]
CATA_PHAAU1.532e-2476.67Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA3_NICPL1.532e-2480.00Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA3_ARATH1.532e-2478.33Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA2_ARATH3.413e-2480.00Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA1_GOSHI3.413e-2481.67Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA2_SOLLC4.457e-2478.33Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA4_SOYBN5.821e-2476.67Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00937 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00937 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623857 ID=BQ623857; Name=BQ623857; organism=Citrus sinensis; type=EST; length=375bp
GAGAGAGATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTTAAT
CGATGGATTAAGGCTTTATGTGACCCACGTGTCACCCATGAGGTTCGCAG
CATATGGGTCTCTTACTGGTCTCAGGCCGACAGATCTCTGGGTCAGAAGC
TAGCTTCTCGTCTCAATGTGAGGCCAAGCATTTGAAGGTGTCACTTGAAC
TGGAACACTGGATGCTTTTGACTTGCCAAGAGTGAGCAAGGAGTGAACAC
CAAGGGTGCAGCATATGTGAAGAATTTCGATCCTATGTTTGCTGTTGTAT
ATTGTAATATAGAAAATAAACTTGCATGTTATGTGACTCTTTTCCTGTTG
TTTCAATTAATAAAAGTCTGTTTTA
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