BQ623866

Overview
NameBQ623866
Unique NameBQ623866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length462
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623866 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 3.002e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 3
Query:    3 SWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 386
            SWR+Q+             D +GYG S  P E E+   + +  +++  LD LG+++   +  D+G    +  AL +PERV  V +L  PFIP        E  K+ P   Y   +QEPG AEA+  ++ ++T
Sbjct:  273 SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRT 404          
BLAST of BQ623866 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 5.121e-12
Identity = 41/132 (31.06%), Postives = 67/132 (50.76%), Query Frame = 3
Query:    3 SWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 386
            SWR+Q+             D +GYG S  P E E+ + + +  +++  LD LGI +   +  D+     +  AL +PERV  V +L  PF+PP       +  +S+P   Y   +QEPG AEA+  ++ ++T
Sbjct:  271 SWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRT 402          
BLAST of BQ623866 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12
Identity = 41/132 (31.06%), Postives = 66/132 (50.00%), Query Frame = 3
Query:    3 SWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 386
            SWR+Q+             D +GYG S  P E E+ + + +  +++  L+ LGI +   +  D+     +  AL HPERV  V +L  P +PP       E  +S+P   Y   +QEPG AEA+  ++ ++T
Sbjct:  271 SWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQLYFQEPGVAEAELEKNMSRT 402          
BLAST of BQ623866 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 3
Query:    3 SWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 386
            SWR+Q+             D +GYG S  P E E+ S + +  D++  L+ LG+++   +  D+G    +  AL +PERV  V +L  PF+P        E  K+ P   Y   +QEPG AEA+  ++  +T
Sbjct:  273 SWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQLYFQEPGVAEAELEQNLDRT 404          
The following BLAST results are available for this feature:
BLAST of BQ623866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
HYES_HUMAN3.002e-1231.82Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
HYES_MOUSE5.121e-1231.06Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
HYES_RAT8.734e-1231.06Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_PIG8.734e-1231.82Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00946 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00946 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623866 ID=BQ623866; Name=BQ623866; organism=Citrus sinensis; type=EST; length=462bp
ACTCGTGGCGCCATCAGATGGTGGCTGTAGCCGCTGCTGGCTTCAGGGCT
ATTGCGCCTGATTACAGAGGCTACGGCCTCTCTGACCCACCTGCTGAACC
CGAAAAGGCCTCCTTTAAAGACATCACTAATGATCTCCTCGCCACTTTAG
ATCACCTCGGAATTAACAAGGTTTTTCTTGTTGCAAAAGATTTTGGAGCC
CGGCCTGCCTACCTGTTTGCACTTCTACACCCAGAGAGGGTCTCCGGTGT
TATTACATTAGGAGTGCCGTTTATACCTCCAGGTACTGCTGAATTTCACA
AATCCCTTCCTGAAGGTTTCTACATATCGAGATGGCAGGAACCTGGACGA
GCAGAAGCTGATTTTGGTCGCCATGATGCAAAGACTGTGGTGAGAAACAT
TTACATTCTTTTCTGCAGAAGTGAAATACCGATAGCACCTGAAAACAAGG
AGATCATGGATT
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