BQ623879
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 2.016e-42 Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 540
H +F +DEIPSGVD +KISMS EDLLN PGETY VTLTEKGTY FYCSPHQGAGMVG+VTVN
Sbjct: 106 HNVVFD-EDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168 HSP 2 Score: 80.1073 bits (196), Expect = 2.016e-42 Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = 2
Query: 80 GLKAGA----TPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
GLKA T A+++ +T +AVP+LS+KA+LK+VG +EVLLGG DGSLAF+P FSV+SGE+IVFKNNAG P
Sbjct: 17 GLKASGSIKPTTAKIIPTT-----TAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFP 105 HSP 3 Score: 26.9498 bits (58), Expect = 2.016e-42 Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query: 342 GFPHNVVFDE 371
GFPHNVVFDE
Sbjct: 103 GFPHNVVFDE 112
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 6.501e-42 Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 540
H +F +DEIP+GVD SKISMS EDLLN GETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct: 108 HNVVFD-EDEIPAGVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170 HSP 2 Score: 89.3521 bits (220), Expect = 6.501e-42 Identity = 48/92 (52.17%), Postives = 62/92 (67.39%), Query Frame = 2
Query: 80 GLKAGATPARVV--GSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
GLKAGA+ + V G++ K +A+ V +L++KA+LKDVG +EVLLGGDDGSLAF+P +FSVS+GEKI FKNNAG P
Sbjct: 16 GLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFP 107
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.148e-41 Identity = 46/64 (71.88%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 540
H +F +D IPSGVD SKISMS EDLLN GET+ V L+ KG YSFYCSPHQGAGMVG+VTVN
Sbjct: 106 HNIVFD-EDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168 HSP 2 Score: 93.9745 bits (232), Expect = 4.148e-41 Identity = 50/90 (55.56%), Postives = 59/90 (65.56%), Query Frame = 2
Query: 80 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
GLKAG+ V ++ K SAS +P+LSIKA++KDVG I+VLLG DDGSLAFVPS FS+S GEKIVFKNNAG P
Sbjct: 16 GLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFP 105
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 9.934e-40 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 540
H LF +D +PSGVDVSKISMS EDLLN GET+ V L++KG Y+FYCSPHQGAGMVG+V VN
Sbjct: 106 HNVLFD-EDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168 HSP 2 Score: 89.7373 bits (221), Expect = 9.934e-40 Identity = 48/90 (53.33%), Postives = 58/90 (64.44%), Query Frame = 2
Query: 80 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
GLKA + V ++ K SAS +P+LSIKA+LK+VG ++VLLG DDGSLAFVPS FSV +GEKIVFKNNAG P
Sbjct: 16 GLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFP 105
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 4.329e-38 Identity = 48/64 (75.00%), Postives = 52/64 (81.25%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 540
H +F +DEIP+GVD SKISM EDLLN PGETY+V L KGTY FYCSPHQGAGMVGQVTVN
Sbjct: 106 HNVVFD-EDEIPAGVDASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168 HSP 2 Score: 72.0182 bits (175), Expect = 4.329e-38 Identity = 40/90 (44.44%), Postives = 48/90 (53.33%), Query Frame = 2
Query: 80 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
GLK A + + S S P+L ++A+LKD G +EVLLG DG LAFVPSS VS+GE IVFKNNAG P
Sbjct: 16 GLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFP 105 HSP 3 Score: 26.9498 bits (58), Expect = 4.329e-38 Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query: 342 GFPHNVVFDE 371
GFPHNVVFDE
Sbjct: 103 GFPHNVVFDE 112
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.570e-37 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 540
H +F +DEIPSGVDV+KISM +DLLNG GETY V LTE GTYSFYC+PHQGAGMVG+VTVN
Sbjct: 105 HNVVFD-EDEIPSGVDVAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167 HSP 2 Score: 75.0998 bits (183), Expect = 2.570e-37 Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 2
Query: 80 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
GLKA + ++ +A A PKL++K++LK+ G IEVLLGG DGSLAF+P+ FS++ GEKIVFKNNAG P
Sbjct: 16 GLKASTIKSSAT-VRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYP 104
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 3.349e-37 Identity = 46/64 (71.88%), Postives = 54/64 (84.38%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 540
H +F +DE+P+GVDV+KISM EDLLN PGE Y+VTLTEKGTY FYC+PH GAGMVG+VTVN
Sbjct: 103 HNVVFD-EDEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165 HSP 2 Score: 75.8702 bits (185), Expect = 3.349e-37 Identity = 45/90 (50.00%), Postives = 53/90 (58.89%), Query Frame = 2
Query: 80 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
GLKA +T +T+K A A P++SIKA+LKDVG EVLLG DG LAFVPS S++SGEKI FKNNAG P
Sbjct: 17 GLKASSTTR---AATVKV-AVATPRMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFP 102
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.301e-35 Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 537
H +F +DEIPSGVD SKISM LLNG GETY VTLTE G+Y FYC+PHQGAGMVG++TV
Sbjct: 109 HNVVFD-EDEIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170 HSP 2 Score: 77.7962 bits (190), Expect = 2.301e-35 Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 2
Query: 80 GLKAGATPARVVGSTMKASASAV---PKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
GLK + ST+ S SA PKL++K++LKD G +EVLLG DDGSLAFVPS F+V+ GEKIVFKNNAG P
Sbjct: 16 GLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFP 108
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS2_TOBAC (Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.369e-35 Identity = 50/64 (78.12%), Postives = 58/64 (90.62%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 540
H +F +DEIP+GVD SKISMS EDLLNGPGETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct: 37 HNVVFD-EDEIPAGVDASKISMSEEDLLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99 HSP 2 Score: 62.003 bits (149), Expect = 2.369e-35 Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 2
Query: 242 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
IEVLLG DDG LAFVP +FSVS+GEKI FKNNAG P
Sbjct: 1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFP 36
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Match: PLAS_RUMOB (Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 6.823e-35 Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 1
Query: 349 HTTLFSMKDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 537
H +F +DE+P+GVD SKISMS EDLLN PGETYAVTL+EKGTYSFYCSPHQGAGMVG+VTV
Sbjct: 37 HNIVFD-EDEVPAGVDASKISMSEEDLLNAPGETYAVTLSEKGTYSFYCSPHQGAGMVGKVTV 98 HSP 2 Score: 62.3882 bits (150), Expect = 6.823e-35 Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 2
Query: 242 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGVP 349
IE+ LGGDDG+LAFVP SF+V++GEKIVFKNNAG P
Sbjct: 1 IEIKLGGDDGALAFVPGSFTVAAGEKIVFKNNAGFP 36 The following BLAST results are available for this feature:
BLAST of BQ623879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623879 ID=BQ623879; Name=BQ623879; organism=Citrus sinensis; type=EST; length=560bpback to top |