BQ623892

Overview
NameBQ623892
Unique NameBQ623892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10518 contig Csv1_Contig10518:320..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of BQ623892 vs. ExPASy Swiss-Prot
Match: QUA1_ARATH (Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 1 
Query:    1 TLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCH 234
            TLPP LI F     P+D SWH+LGLGY    S++ ++ AAV+H+NG  KPWL I     RP W K+V+Y  +FV+ C+
Sbjct:  479 TLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACN 556
[Close]
BLAST of BQ623892 vs. ExPASy Swiss-Prot
Match: GLTR_ARATH (Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.038e-16
Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = 1 
Query:    1 TLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCH 234
            TLPP LI F      +D SWH+LGLGY    S++ ++ A VIHYNG  KPWL I     +  W KYV+   +FV+ C+
Sbjct:  481 TLPPGLITFYSKTKSLDKSWHVLGLGYNPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCN 558
The following BLAST results are available for this feature:
BLAST of BQ623892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
QUA1_ARATH2.918e-1948.72Glycosyltransferase QUASIMODO1 OS=Arabidopsis thal... [more]
GLTR_ARATH1.038e-1646.15Uncharacterized glycosyltransferase At3g02350 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00972 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00972 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623892 ID=BQ623892; Name=BQ623892; organism=Citrus sinensis; type=EST; length=541bp
ACTTTACCACCTGCTTTGATAGCATTTAAAGGCCATGTTCATCCAATTGA
TCCCTCGTGGCACTTGCTTGGCTTGGGCTATCAGAATAAGACCAGCATTG
AGAGTGTGAAAAAGGCTGCAGTAATCCACTACAATGGCCAGTCAAAACCA
TGGCTGCAAATAGGGTTTGAGCATCTCCGGCCTTTTTGGGCCAAATATGT
CAACTACTCCAATGATTTTGTGAGGAACTGCCACATCCTGGAGACATAGT
CCATCGTCTAGATAAGCTAGAAAAAAGAGATGGAAATGGGAAAAGACATT
AATGGTAAGGGTTTAACATACATTTTGTTGTCTCTCGAGATTTCTCTCAA
GGTCTGTTTGAGAGGGCCAGTTGAATTAGTGGCCAAAAGGGCAATGCTGT
CCGGGTTTAGATTTGCTGTCATCCCCACACCTATACAGAAATTGTTCCTG
CATCACCAGCTCGGGTCGGGCATGAGTTTCATTCTTTCTGTAACATACAA
AATCCATCATCATTTTTTGGTTCGGAAAAGGATACTATTAT
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