BQ623896

Overview
NameBQ623896
Unique NameBQ623896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8174 contig Csv1_Contig8174:397..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKBP4_HUMAN (FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 9.522e-27
Identity = 64/116 (55.17%), Postives = 79/116 (68.10%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 437
            G  I    DEGV+K I R+     +    D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGEV  +TCKPEYAYGSAGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTEMPMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVEL 134          
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKBP4_RAT (FK506-binding protein 4 OS=Rattus norvegicus GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 1.624e-26
Identity = 64/116 (55.17%), Postives = 79/116 (68.10%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 437
            G  I    DEGV+K I R+      +   D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGEV  +TCKPEYAYGSAGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTETAMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVEL 134          
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKBP4_RABIT (FK506-binding protein 4 OS=Oryctolagus cuniculus GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 2.770e-26
Identity = 63/116 (54.31%), Postives = 79/116 (68.10%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 437
            G  I    DEGV+K I R+          D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGE+ ++TCKPEYAYGSAGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTETPMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKPEYAYGSAGSPPKIPPNATLVFEVEL 134          
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKBP4_MOUSE (FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 PE=1 SV=5)

HSP 1 Score: 116.701 bits (291), Expect = 6.172e-26
Identity = 63/116 (54.31%), Postives = 78/116 (67.24%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 437
            G  I    DEGV+K I R+          D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGEV  +TCKPEYAYG+AGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTETPMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGAAGSPPKIPPNATLVFEVEL 134          
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKBP4_BOVIN (FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=1 SV=4)

HSP 1 Score: 115.161 bits (287), Expect = 1.796e-25
Identity = 63/116 (54.31%), Postives = 77/116 (66.38%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 437
            G  I    DEGV+K I R+          D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGEV  +TCKPEYAYG AGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTETPMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDRFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGLAGSPPKIPPNATLVFEVEL 134          
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKB59_DROME (FK506-binding protein 59 OS=Drosophila melanogaster GN=FKBP59 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.423e-24
Identity = 56/117 (47.86%), Postives = 79/117 (67.52%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 440
            G+ IDL+GD GV+K+I+++              V +HY G L + G  FD++   N  F F LGKG+VI+A+D+ + +MK+GE   LTC P YAYG+AGSPP +PPDATLIFE+E++
Sbjct:    4 GNKIDLSGDGGVLKEILKEGT--GTETPHSGCTVSLHYTGRLVD-GTEFDSSLSRNEPFEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPPAIPPDATLIFELEML 117          
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKBP5_PONAB (FK506-binding protein 5 OS=Pongo abelii GN=FKBP5 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 440
            G+ I    D GV+K + R    +      D   V VHY+G L+  G+ FD++H+ N  F F LGKG VI+AWDI + +MK GE+  L CKPEYAYGSAGS P +P +ATL FE+EL+
Sbjct:   22 GEDITSKKDRGVLKIVKRVGNGEETPMIGDK--VYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 135          
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKBP5_HUMAN (FK506-binding protein 5 OS=Homo sapiens GN=FKBP5 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 440
            G+ I    D GV+K + R    +      D   V VHY+G L+  G+ FD++H+ N  F F LGKG VI+AWDI + +MK GE+  L CKPEYAYGSAGS P +P +ATL FE+EL+
Sbjct:   22 GEDITSKKDRGVLKIVKRVGNGEETPMIGDK--VYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 135          
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKBP5_SAIBB (FK506-binding protein 5 OS=Saimiri boliviensis boliviensis GN=FKBP5 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.387e-23
Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVD----VHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 440
            G+ +    D GV+K + R      +   E+ P++     VHY G LA  G+ FD++H+ N  F F +GKG VI+AWDI + +MK GE+  L CKPEYAYG+ GS P +P +ATL FEVEL+
Sbjct:   22 GEDVTSKKDRGVLKIVKR------VGHGEETPMIGDRVYVHYNGKLAN-GKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEVELL 135          
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Match: FKBP5_SAGOE (FK506-binding protein 5 OS=Saguinus oedipus GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.423e-22
Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 3
Query:   90 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVD----VHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 440
            G+ +    D GV+K + R      +   E+ P++     VHY G L+  G+ FD++H+ N  F F +GKG VI+AWDI + +MK GE+  L CKPEYAYG+ GS P +P +ATL FEVEL+
Sbjct:   22 GEDVTSKKDRGVLKIVKR------VGHGEETPMIGDKVYVHYNGKLSN-GKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEVELL 135          
The following BLAST results are available for this feature:
BLAST of BQ623896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
FKBP4_HUMAN9.522e-2755.17FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 P... [more]
FKBP4_RAT1.624e-2655.17FK506-binding protein 4 OS=Rattus norvegicus GN=Fk... [more]
FKBP4_RABIT2.770e-2654.31FK506-binding protein 4 OS=Oryctolagus cuniculus G... [more]
FKBP4_MOUSE6.172e-2654.31FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 P... [more]
FKBP4_BOVIN1.796e-2554.31FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=... [more]
FKB59_DROME4.423e-2447.86FK506-binding protein 59 OS=Drosophila melanogaste... [more]
FKBP5_PONAB9.853e-2448.72FK506-binding protein 5 OS=Pongo abelii GN=FKBP5 P... [more]
FKBP5_HUMAN9.853e-2448.72FK506-binding protein 5 OS=Homo sapiens GN=FKBP5 P... [more]
FKBP5_SAIBB6.387e-2345.45FK506-binding protein 5 OS=Saimiri boliviensis bol... [more]
FKBP5_SAGOE1.423e-2244.63FK506-binding protein 5 OS=Saguinus oedipus GN=FKB... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00976 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00976 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623896 ID=BQ623896; Name=BQ623896; organism=Citrus sinensis; type=EST; length=510bp
AGTCAATCGGTCAACTCGATCTCTCTTTTACGGTCGATAATTTTCATCTC
ATCACGATACGGTAGGGTTTTAAGCATTGAGAAGTTATGGGTGATTCAAT
TGATTTGACGGGTGATGAAGGTGTCATCAAGAAGATCGTAAGGCAAGCTA
AACCTGATGCTCTCTCTCCTACTGAGGACCTTCCTCTTGTTGATGTTCAT
TATGAAGGCAGTCTTGCTGAAACTGGTGAAGTTTTCGATACCACACATGA
AGACAATACTGTATTTTCTTTTGAGCTTGGGAAGGGTTCAGTGATTCGGG
CTTGGGATATTGCATTAAGAAGCATGAAGGTTGGGGAGGTTGCAAAACTC
ACTTGCAAGCCAGAATATGCCTATGGCAGTGCAGGATCTCCTCCAGATGT
CCCACCTGATGCGACACTTATTTTTGAGGTGGAGTTGGTGGCCTGCAGGC
CAAGGAAAGGTTCTAGTCTTGGTAGCGTATCGGAAGAGAGAGCCAGGCCT
AGAGGAGCTT
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