BQ623900

Overview
NameBQ623900
Unique NameBQ623900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8932 contig Csv1_Contig8932:104..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: ZB14_MAIZE (14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.829e-56
Identity = 107/129 (82.95%), Postives = 118/129 (91.47%), Query Frame = 1
Query:   19 MASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            M+SE EAA+  +  DSPTIFDKII KEIPS VVYED+KVLAFRDI+PQAPTHILIIPKVKDGLTGL+KAEERH EILG LLY AK+VAKQEGLEDG+R+VINDGP+G QSV+HIHVHLLGGRQMNWPPG
Sbjct:    1 MSSEKEAALRRL-DDSPTIFDKIIKKEIPSTVVYEDEKVLAFRDINPQAPTHILIIPKVKDGLTGLAKAEERHIEILGYLLYVAKVVAKQEGLEDGYRVVINDGPSGCQSVYHIHVHLLGGRQMNWPPG 128          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: ZB14_BRAJU (14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.041e-50
Identity = 95/112 (84.82%), Postives = 103/112 (91.96%), Query Frame = 1
Query:   70 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            TIF KII+KEIPS VVYEDDKVLAFRDI PQ P HIL+IPKV+DGLTGL KAEERH +ILGRLLYTAKLVAKQEGL++GFRIVINDGP G QSV+HIHVHL+GGRQMNWPPG
Sbjct:    2 TIFGKIISKEIPSTVVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLFKAEERHIDILGRLLYTAKLVAKQEGLDEGFRIVINDGPQGCQSVYHIHVHLIGGRQMNWPPG 113          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: HINT1_BOVIN (Histidine triad nucleotide-binding protein 1 OS=Bos taurus GN=HINT1 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.576e-33
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 1
Query:   19 MASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            MA E   A  A P    TIF KII KEIP+K++YEDD+ LAF DI PQAPTH L+IPK    ++ +S AE+    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+H+H+H+LGGRQMNWPPG
Sbjct:    1 MADEIAKAQVARPGGD-TIFGKIIRKEIPAKIIYEDDQCLAFHDISPQAPTHFLVIPKKY--ISQISAAEDDDESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: Y1390_SYNE7 (Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.365e-33
Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 1
Query:   70 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            TIF KII +EIP+ +VYEDD  LAFRD+ PQAP HIL+IPK    +  L +A   H  +LG LL T K +A QEGL +G+R VIN GP GGQ+V+H+H+HLLGGR + WPPG
Sbjct:    5 TIFGKIIRREIPADIVYEDDLCLAFRDVAPQAPVHILVIPK--QPIANLLEATAEHQALLGHLLLTVKAIAAQEGLTEGYRTVINTGPAGGQTVYHLHIHLLGGRSLAWPPG 114          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: HINT1_RABIT (Histidine triad nucleotide-binding protein 1 OS=Oryctolagus cuniculus GN=HINT1 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 4.395e-33
Identity = 69/129 (53.49%), Postives = 91/129 (70.54%), Query Frame = 1
Query:   19 MASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            MA E   A  A P    TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK    ++ +S AE+    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+H+H+H+LGGRQMNWPPG
Sbjct:    1 MADEIAKAQVARPGGD-TIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKH--ISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: HINT2_BOVIN (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos taurus GN=HINT2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.496e-33
Identity = 65/124 (52.42%), Postives = 90/124 (72.58%), Query Frame = 1
Query:   34 EAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            +A  AA    +PTIF +I+++ +P+ ++YED + LAFRD+ PQAP H L+IPK    +  +S+AEE   ++LG LL  AK  AK EGL DG+R+VINDG  G QSV+H+H+H+LGGRQ+ WPPG
Sbjct:   42 KAQQAAPGGAAPTIFSRILDRSLPADILYEDQQCLAFRDVAPQAPVHFLVIPKKP--IPRISQAEEEDQQLLGHLLLVAKETAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: HINT1_RAT (Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus GN=Hint1 PE=1 SV=5)

HSP 1 Score: 139.813 bits (351), Expect = 9.790e-33
Identity = 69/129 (53.49%), Postives = 91/129 (70.54%), Query Frame = 1
Query:   19 MASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            MA E   A  A P    TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK    ++ +S A++    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+HIH+H+LGGRQMNWPPG
Sbjct:    1 MADEIAKAQVAQPGGD-TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: HINT1_MOUSE (Histidine triad nucleotide-binding protein 1 OS=Mus musculus GN=Hint1 PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 9.790e-33
Identity = 69/129 (53.49%), Postives = 91/129 (70.54%), Query Frame = 1
Query:   19 MASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            MA E   A  A P    TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK    ++ +S A++    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+HIH+H+LGGRQMNWPPG
Sbjct:    1 MADEIAKAQVAQPGGD-TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: HINT_CAEEL (Histidine triad nucleotide-binding protein 1 OS=Caenorhabditis elegans GN=hint-1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.279e-32
Identity = 64/132 (48.48%), Postives = 96/132 (72.73%), Query Frame = 1
Query:   19 MASENEAAVAAVPSD---SPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            M+  ++A +AA+  D   + T+F KII KEIP+K+++EDD+ LAF D+ PQAP H L+IPK +  +  L  A +    ++G+L+ TA  VAKQ G+ +G+R+V+N+G +G QSVFH+H+H+LGGRQ+ WPPG
Sbjct:    1 MSEVDKAHLAAINKDVQANDTLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDM--LENAVDSDAALIGKLMVTASKVAKQLGMANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: HINT2_HUMAN (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Homo sapiens GN=HINT2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.279e-32
Identity = 68/128 (53.12%), Postives = 91/128 (71.09%), Query Frame = 1
Query:   31 NEAAVA--AVPSDS-PTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 405
            NE A A  A P  + PTIF +I++K +P+ ++YED + L FRD+ PQAP H L+IPK    +  +S+AEE   ++LG LL  AK  AK EGL DG+R+VINDG  G QSV+H+H+H+LGGRQ+ WPPG
Sbjct:   38 NEVAKAQQATPGGAAPTIFSRILDKSLPADILYEDQQCLVFRDVAPQAPVHFLVIPKKP--IPRISQAEEEDQQLLGHLLLVAKQTAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163          
The following BLAST results are available for this feature:
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ZB14_MAIZE2.829e-5682.9514 kDa zinc-binding protein OS=Zea mays GN=ZBP14 P... [more]
ZB14_BRAJU1.041e-5084.8214 kDa zinc-binding protein (Fragment) OS=Brassica... [more]
HINT1_BOVIN2.576e-3354.26Histidine triad nucleotide-binding protein 1 OS=Bo... [more]
Y1390_SYNE73.365e-3358.93Uncharacterized HIT-like protein Synpcc7942_1390 O... [more]
HINT1_RABIT4.395e-3353.49Histidine triad nucleotide-binding protein 1 OS=Or... [more]
HINT2_BOVIN7.496e-3352.42Histidine triad nucleotide-binding protein 2, mito... [more]
HINT1_RAT9.790e-3353.49Histidine triad nucleotide-binding protein 1 OS=Ra... [more]
HINT1_MOUSE9.790e-3353.49Histidine triad nucleotide-binding protein 1 OS=Mu... [more]
HINT_CAEEL1.279e-3248.48Histidine triad nucleotide-binding protein 1 OS=Ca... [more]
HINT2_HUMAN1.279e-3253.13Histidine triad nucleotide-binding protein 2, mito... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00980 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00980 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623900 ID=BQ623900; Name=BQ623900; organism=Citrus sinensis; type=EST; length=596bp
CATTTGTCTGCCGTCGTCATGGCTTCAGAGAACGAGGCTGCTGTTGCAGC
CGTTCCTTCTGATTCGCCTACCATATTTGACAAAATAATTAACAAAGAAA
TCCCATCTAAAGTTGTTTATGAGGATGATAAGGTCTTAGCCTTTAGGGAC
ATAGATCCCCAAGCTCCTACACACATTCTAATTATTCCCAAAGTGAAGGA
TGGCTTGACTGGACTTTCAAAGGCCGAGGAAAGGCATTGCGAAATTCTTG
GCCGCCTTCTTTACACTGCTAAGCTTGTTGCTAAACAGGAAGGACTAGAA
GACGGCTTTAGGATTGTGATTAATGATGGGCCAAATGGAGGTCAATCAGT
TTTTCACATCCACGTCCACCTCCTAGGAGGACGACAAATGAACTGGCCCC
CGGGCTAAGATGAAGTATTTTGGGTGCCAGATTCTCTTATGAAAAAATGA
TTATGCCCTTTGTACTTTAATATGCATCAAGCTGCATCGAGCTTCAAATA
ACAAACTAATTGGTGGCTGCTTTGAGCCACATTATTTGATATGATGTGAA
ATGACATTGTGCTGAAAGGAGAAAAAGACCTTCAATAATAAGGGTG
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