BQ623909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: TSAP1_RAT (tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.251e-30 Identity = 71/146 (48.63%), Postives = 101/146 (69.18%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 429 GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ Sbjct: 8 GDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQ 150
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: TSAP1_HUMAN (tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.251e-30 Identity = 71/146 (48.63%), Postives = 101/146 (69.18%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 429 GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ Sbjct: 8 GDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQ 150
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: TSAP1_BOVIN (tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.251e-30 Identity = 71/146 (48.63%), Postives = 101/146 (69.18%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 429 GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ Sbjct: 8 GDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQ 150
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: TSAP1_MOUSE (tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 2.787e-30 Identity = 71/146 (48.63%), Postives = 100/146 (68.49%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 429 GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D TG +KGYGFV+F DE EQ Sbjct: 8 GDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQ 150
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: TSAP1_PONAB (tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.641e-30 Identity = 70/146 (47.95%), Postives = 100/146 (68.49%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 429 GDL+ +MDE +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+ ++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ Sbjct: 8 GDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYVTYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQ 150
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: TSP1L_DANRE (tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.189e-26 Identity = 62/149 (41.61%), Postives = 93/149 (62.42%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLPA 438 GDL +MDE ++ F+ GE VK+I ++ TG GY F+E A +R +Q NG +P N + F+LN+A++G ++ + P+ ++FVGDL ++V DY L + F ++PS KGAKVV D G ++GYGFV+F DE+EQ A Sbjct: 11 GDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYG--KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKKFPSCKGAKVVTDPY-GNSRGYGFVKFSDENEQKKA 156
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.279e-26 Identity = 62/148 (41.89%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ--IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT---PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 429 GDL+ WMD T++ +A E V VKV+R+K + + Y F++F S A AER L +N T +P F+LNWA+ G + + P+ +IFVGDL D L TFR+ YPS AK+++D +TG ++ YGFVRF E EQ Sbjct: 90 GDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQ 237
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 8.685e-24 Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLPA 438 G+L+ W+ E ++ + G+ V VK+IRN+ TG GY F+EF S A + + N P+P F+LNWAS G ++ +++IFVGDL+ +V ++ + F +RY S K AK++ D T ++GYGFVRF DE++Q A Sbjct: 98 GELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSA 244
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: TSAP1_DANRE (tRNA selenocysteine 1-associated protein 1 OS=Danio rerio GN=trnau1ap PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.298e-19 Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 429 G+L+ +MDE ++ FA GE VV +++IR+K TG+ GYGF+E ER L+ NG P+P + F+L+ +++G K+ ++ ++FV DL DV D ML E F + S K+V+D G +K GFV F E EQ Sbjct: 7 GNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLRKVNGKPLPGATPPKRFKLSRSNYG---KQGESSTFSLFVSDLTPDVDDGMLYEFFHYHFSSCCSGKIVLD-ANGHSKCCGFVSFESEREQ 148
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 9.625e-15 Identity = 46/120 (38.33%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 112 GYGFIEFISRAGAERVLQTFNGTPMPNG-------------EQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 429 GY F+EF ++ A+ L + N TP+PN ++ FRLNWAS + TP+ ++FVGDL+ T+ L F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ Sbjct: 129 GYCFVEFETQKDAKFAL-SLNATPLPNFYSPTTNSQTNPTFKRTFRLNWASGATLQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDER 247 The following BLAST results are available for this feature:
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623909 ID=BQ623909; Name=BQ623909; organism=Citrus sinensis; type=EST; length=439bpback to top |