BQ623910

Overview
NameBQ623910
Unique NameBQ623910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length407
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9505 contig Csv1_Contig9505:109..515. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD1_CITUN (Defender against cell death 1 OS=Citrus unshiu GN=DAD1 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 7.471e-51
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 2
Query:    5 SLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            SLRSAYAATPTTLKIIDLY+GFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTA+LAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG
Sbjct:   15 SLRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 115          
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD1_MALDO (Defender against cell death 1 OS=Malus domestica GN=DAD1 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.558e-48
Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = 2
Query:    2 DSLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            DSLRSAY+ATPTTLKIIDLY+GFAV TALIQVVYMAIVGSFPFNSFLSGVLSC+GTA+LAVCLRIQVNK+NKEFKDL PERAFADFVLCNLVLH+VIMNFLG
Sbjct:   18 DSLRSAYSATPTTLKIIDLYIGFAVSTALIQVVYMAIVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHMVIMNFLG 119          
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD1_SOLLC (Defender against cell death 1 OS=Solanum lycopersicum GN=DAD1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.722e-47
Identity = 93/101 (92.08%), Postives = 98/101 (97.03%), Query Frame = 2
Query:    5 SLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            SLRSAYAATPT LKIIDLY+ FA+ TALIQVVYMAIVGSFPFNSFLSGVLSC+GTA+LAVCLRIQVNK+NKEFKDLPPERAFADFVLCNLVLHLVIMNFLG
Sbjct:   16 SLRSAYAATPTNLKIIDLYVIFAISTALIQVVYMAIVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKENKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 116          
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD1_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Arabidopsis thaliana GN=DAD1 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 1.116e-46
Identity = 91/101 (90.10%), Postives = 98/101 (97.03%), Query Frame = 2
Query:    5 SLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            SLRSAY+ATPT LKIIDLY+ FAVFTALIQVVYMA+VGSFPFNSFLSGVLSC+GTA+LAVCLRIQVNK+NKEFKDL PERAFADFVLCNLVLHLVI+NFLG
Sbjct:   15 SLRSAYSATPTNLKIIDLYVVFAVFTALIQVVYMALVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115          
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD1_BETVE (Defender against cell death 1 OS=Betula verrucosa GN=DAD1 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.458e-46
Identity = 91/101 (90.10%), Postives = 98/101 (97.03%), Query Frame = 2
Query:    5 SLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            SLRSAYAATP+ LKIIDLY+ FAVFTALIQVVYMAIVGSFPFN+FLSG+LSC+GTA+LAVCLRIQVNK+NKEFKDL PERAFADFVLCNLVLHLVIMNFLG
Sbjct:   15 SLRSAYAATPSNLKIIDLYVVFAVFTALIQVVYMAIVGSFPFNAFLSGLLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIMNFLG 115          
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD1_ORYSJ (Defender against cell death 1 OS=Oryza sativa subsp. japonica GN=DAD1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.904e-46
Identity = 92/101 (91.09%), Postives = 95/101 (94.06%), Query Frame = 2
Query:    5 SLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            SL  AYAATPT LKIIDLY+ FAV TALIQVVYM IVGSFPFNSFLSGVLSC+GTA+LAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG
Sbjct:   14 SLGKAYAATPTNLKIIDLYVVFAVATALIQVVYMGIVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 114          
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD1_ORYSI (Defender against cell death 1 OS=Oryza sativa subsp. indica GN=DAD1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.904e-46
Identity = 92/101 (91.09%), Postives = 95/101 (94.06%), Query Frame = 2
Query:    5 SLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            SL  AYAATPT LKIIDLY+ FAV TALIQVVYM IVGSFPFNSFLSGVLSC+GTA+LAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG
Sbjct:   14 SLGKAYAATPTNLKIIDLYVVFAVATALIQVVYMGIVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 114          
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD2_ARATH (Defender against cell death 2 OS=Arabidopsis thaliana GN=DAD2 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.612e-45
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 2
Query:    5 SLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            SL SAY ATPT LKIIDLY+ FAVFTALIQV YMA+VGSFPFNSFLSGVLSC+GTA+LAVCLRIQVNK+NKEFKDL PERAFADFVLCNLVLHLVI+NFLG
Sbjct:   15 SLHSAYTATPTNLKIIDLYVCFAVFTALIQVAYMALVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115          
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD1_PICMA (Defender against cell death 1 OS=Picea mariana GN=DAD1 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 3.591e-45
Identity = 86/101 (85.15%), Postives = 97/101 (96.04%), Query Frame = 2
Query:    5 SLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            SLRSAY+ATPT LKIIDLY+ +A+ TA++QVVYMAIVGSFPFN+FLSGVLSC GTA+LAVCLR+QVNK+N+EFKDLPPERAFADFVLCNLVLHLVIMNFLG
Sbjct:   15 SLRSAYSATPTKLKIIDLYVVYAILTAVVQVVYMAIVGSFPFNAFLSGVLSCTGTAVLAVCLRMQVNKENREFKDLPPERAFADFVLCNLVLHLVIMNFLG 115          
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Match: DAD2_HORVU (Defender against cell death 2 OS=Hordeum vulgare GN=DAD2 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.126e-45
Identity = 89/101 (88.12%), Postives = 93/101 (92.08%), Query Frame = 2
Query:    5 SLRSAYAATPTTLKIIDLYMGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAILAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 307
            SL  AYAATPT LKIIDLY+ FAV TAL+QVVYM IVGSFPFNSFLSGVLS +GTA+L VCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG
Sbjct:   14 SLNKAYAATPTNLKIIDLYVVFAVATALVQVVYMGIVGSFPFNSFLSGVLSSIGTAVLGVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 114          
The following BLAST results are available for this feature:
BLAST of BQ623910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
DAD1_CITUN7.471e-5198.02Defender against cell death 1 OS=Citrus unshiu GN=... [more]
DAD1_MALDO1.558e-4892.16Defender against cell death 1 OS=Malus domestica G... [more]
DAD1_SOLLC1.722e-4792.08Defender against cell death 1 OS=Solanum lycopersi... [more]
DAD1_ARATH1.116e-4690.10Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
DAD1_BETVE1.458e-4690.10Defender against cell death 1 OS=Betula verrucosa ... [more]
DAD1_ORYSJ1.904e-4691.09Defender against cell death 1 OS=Oryza sativa subs... [more]
DAD1_ORYSI1.904e-4691.09Defender against cell death 1 OS=Oryza sativa subs... [more]
DAD2_ARATH1.612e-4588.12Defender against cell death 2 OS=Arabidopsis thali... [more]
DAD1_PICMA3.591e-4585.15Defender against cell death 1 OS=Picea mariana GN=... [more]
DAD2_HORVU6.126e-4588.12Defender against cell death 2 OS=Hordeum vulgare G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00990 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00990 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623910 ID=BQ623910; Name=BQ623910; organism=Citrus sinensis; type=EST; length=407bp
GGATTCCCTTCGCTCTGCTTATGCTGCCACTCCCACAACTCTTAAGATCA
TCGATCTGTATATGGGTTTCGCGGTTTTTACTGCCTTAATTCAGGTAGTT
TACATGGCTATTGTTGGATCCTTCCCATTCAACTCTTTTCTTTCGGGAGT
ACTTTCTTGTGTTGGGACAGCCATACTTGCTGTTTGTCTACGTATTCAAG
TGAACAAGGACAACAAGGAATTTAAGGACCTACCACCAGAGCGAGCTTTT
GCGGACTTTGTTCTCTGCAATTTGGTGCTGCATTTGGTGATCATGAATTT
CCTTGGATAAACCTTGACCCTGGGTCAACTTAAAATACAATTTTCTTGGT
CGATGACAGTGTGACCTACCTGTAAAAGTTAGTTACCACATTAATGCAGA
TATTTTT
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