C21900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL212_ARATH (60S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.500e-27 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 1 Query: 61 MPAGHGLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 MPAGHG+R+RTRD FARPFRKKGYIPLSTYLRT+K+GDYVDVKVNGA+ KGMPHKFYHGR Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL211_ARATH (60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 1.500e-27 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 1 Query: 61 MPAGHGLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 MPAGHG+R+RTRD FARPFRKKGYIPLSTYLRT+K+GDYVDVKVNGA+ KGMPHKFYHGR Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL21B_SCHPO (60S ribosomal protein L21-B OS=Schizosaccharomyces pombe GN=rpl21b PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.836e-18 Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 61 MPAGHGLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 MP +G+R+RTR F R FR+ G I LSTYL+TYK+GD VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL21A_SCHPO (60S ribosomal protein L21-A OS=Schizosaccharomyces pombe GN=rpl21a PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.836e-18 Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 61 MPAGHGLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 MP +G+R+RTR F R FR+ G I LSTYL+TYK+GD VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL21A_YEAST (60S ribosomal protein L21-A OS=Saccharomyces cerevisiae GN=RPL21A PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.654e-16 Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 61 MPAGHGLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 M HG RSRTR F R FRK G + LSTYL+ YK+GD VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL21_DICDI (60S ribosomal protein L21 OS=Dictyostelium discoideum GN=rpl21 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.913e-16 Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 61 MPAGHGLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 MP GLR+RTR F+R FR G + +T+LRT+++GDYVD+K G V KGMPHKFYHGR Sbjct: 1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGR 60
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL21B_YEAST (60S ribosomal protein L21-B OS=Saccharomyces cerevisiae GN=RPL21B PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.913e-16 Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 61 MPAGHGLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 M HG RSRTR F R FRK G + +STYL+ YK+GD VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGK 60
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL21_CYAPA (60S ribosomal protein L21 OS=Cyanophora paradoxa GN=RPL21 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14 Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 61 MPAGHGLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 MP +G R+RTR FAR F+ G + LSTYL +KIG+YVDV N AV KGMP K+YHGR Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL21_RAT (60S ribosomal protein L21 OS=Rattus norvegicus GN=Rpl21 PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.233e-13 Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 76 GLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 G R TR F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+ Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
BLAST of C21900 vs. ExPASy Swiss-Prot
Match: RL21_MOUSE (60S ribosomal protein L21 OS=Mus musculus GN=Rpl21 PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.233e-13 Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 76 GLRSRTRDXFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVXKGMPHKFYHGR 240 G R TR F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+ Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60 The following BLAST results are available for this feature:
BLAST of C21900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >C21900 ID=C21900; Name=C21900; organism=Citrus sinensis; type=EST; length=241bpback to top |