C21910

Overview
NameC21910
Unique NameC21910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length349
Libraries
Library NameType
Valencia orange young seeds cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of C21910 vs. ExPASy Swiss-Prot
Match: UCP7_SCHPO (UBA domain-containing protein 7 OS=Schizosaccharomyces pombe GN=ucp7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.533e-11
Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 1 
Query:   10 RNRLAEALDADVKRWSRGKAGNLRALLSTXQYILGPDSGWQPIPLTXLIATAAVKKAYXRATLVVHPDKLQQRGAIYSXVHMXKVFXLL 276
            R+RL E +   V +W  GK  NLRALL++   IL P+  WQ + L+ L+    VK AY +A   VHPDKL Q+ ++   +     F +L
Sbjct:  596 RSRLREPVQQIVNKWKEGKESNLRALLASLDTILWPECRWQKVSLSELVLPKKVKIAYMKAVSRVHPDKLPQQTSVEHQLIAESAFSIL 684
The following BLAST results are available for this feature:
BLAST of C21910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UCP7_SCHPO1.533e-1139.33UBA domain-containing protein 7 OS=Schizosaccharom... [more]
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Properties
Property NameValue
Genbank descriptionC21910 Valencia orange young seeds cDNA Citrus sinensis cDNA clone corVSSE-15R 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>C21910 ID=C21910; Name=C21910; organism=Citrus sinensis; type=EST; length=349bp
GGCACGAGGAGAAATAGATTAGCAGAAGCTCTAGATGCTGATGTCAAAAG
GTGGTCACGTGGGAAGGCTGGAAACTTGCGTGCGCTGCTTTCAACGNTAC
AATATATCCTTGGGCCTGATAGTGGTTGGCAGCCAATTCCACTAACAGNT
CTTATAGCAACTGCTGCTGTAAAGAAAGCNTACANGAGGGCCACACTTGT
TGTTCATCCCGACAAGTTACAGCAGCGNGGTGCAATTTACAGCNGAGTAC
ACATGTNAAAAGTTTTTGNTCTTCTAAAGGAGCGTGGACAGTTTCATTNN
GGGGCCGTAAAAGTTTCNTTANAANGATTTTTTGGTNAAGCCGAATTTT
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