CA588037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CA588037 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.631e-17 Identity = 41/64 (64.06%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 7 DPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI 198 +P++KAAFE+F+ +++E E ID RN+N KNR GA IVPYELLKPFSEPG TG+G+P SISI Sbjct: 833 EPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
BLAST of CA588037 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.655e-17 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 4 DDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI 198 ++PVI AAFE F K+Q LE +ID+RN N LKNR GA +V YELLKP SE G TG GVPYSISI Sbjct: 832 NEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
BLAST of CA588037 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.305e-13 Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 1 Query: 7 DPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI 198 D ++AA++ F +++E+E +ID RN + LKNR GA I+PY+L+KPFS+ G TG G+P S SI Sbjct: 861 DAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924
BLAST of CA588037 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.010e-13 Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 7 DPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI 198 D ++AA+ F +++E+E +ID RN + LKNR GA I+PY+L+KPFS+ G TG G+P S SI Sbjct: 878 DAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
BLAST of CA588037 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.328e-12 Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 25 AFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI 198 AFE+F K++E+E+ ID+RN +E LKNRTG +PY LL P SE G TG+G+P S+SI Sbjct: 802 AFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859
BLAST of CA588037 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11 Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 4 DDPVIKAAFEEFNLKMQELERIIDDRNSNENLKNRTGAAIVPYELLKPFSEPGATGKGVPYSISI 198 D+ V+K F +F+ ++ ++E+ I++RN ++ LKNRTGA + PYELL P S G TG+G+P SISI Sbjct: 854 DEQVVKY-FNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917 The following BLAST results are available for this feature:
BLAST of CA588037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CA588037 ID=CA588037; Name=CA588037; organism=Citrus sinensis; type=EST; length=474bpback to top |