CB250248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250248 vs. ExPASy Swiss-Prot
Match: U424_DICDI (UPF0424 protein OS=Dictyostelium discoideum GN=DDB_G0277951 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.207e-35 Identity = 76/174 (43.68%), Postives = 112/174 (64.37%), Query Frame = 1 Query: 19 VSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVVTIVYELRPNPSDHKTKSESGGGLSH 540 ++ LNE V GSV+ +FK+WE R + +H + D EL++ IPF +IKSI I+GG G+SP+KM+ +IN IDF + QEW+L E+ +G + Y T+ +KF ++ ++TL+FP NFG TT+I++I LKG T KR++V T VYE +P DH KS+ G+SH Sbjct: 31 ITCLNEKVKGSVRHIFKSWEDRHDL--KHFVESCDDEELIINIPFGAVTQIKSIIIIGGDGGSSPNKMKAYINNSNIDFGNINSFACTQEWNLHEDFEGQIGYSTKPTKFNNINHLTLYFPSNFGSPTTKIYFIALKGVYTSAKREIVNT-VYESKPQLQDH--KSDIFNGVSH 199
BLAST of CB250248 vs. ExPASy Swiss-Prot
Match: CA128_HUMAN (UPF0424 protein C1orf128 OS=Homo sapiens GN=C1orf128 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.579e-30 Identity = 71/163 (43.56%), Postives = 104/163 (63.80%), Query Frame = 1 Query: 19 VSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVVTIVYELRPNPSDHK 507 + LNE+ GS + VFK WE+R + S + +ES D D ELL IPFT +VK+K I I+G D + PS+MR++ N + F D + + Q + L +L G LEY T+ S+F +V ++++H NFG DTT++ YIGL+GE T+L+R V YE NP+DH+ Sbjct: 40 LQCLNESREGSGRGVFKPWEERTDRS-KFVES-DADEELLFNIPFTGNVKLKGIIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPDQTFSLNRDLTGELEYATKISRFSNVYHLSIHISKNFGADTTKVFYIGLRGEWTELRRHEVTICNYEASANPADHR 199
BLAST of CB250248 vs. ExPASy Swiss-Prot
Match: U424_DROPS (UPF0424 protein GA19395 OS=Drosophila pseudoobscura pseudoobscura GN=GA19395 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.293e-29 Identity = 71/171 (41.52%), Postives = 103/171 (60.23%), Query Frame = 1 Query: 19 VSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVVTIVYELRPNPSDHKTKSESGGG 531 + LNE GS K+VFK +E R + S +D D ELL IPFT ++K+K I I G D + P+K+++F NR + F DA+ ++ QE++L + +G +EY + F SV ++TL+FP NFG D T+I+YIGL+GE ++ V YE R N +DHK K G G Sbjct: 40 LECLNEETEGSGKTVFKPYESRQDMS--KFVQSDADEELLFNIPFTGNIKLKGIIICGANDDSHPNKVKIFKNRPKMTFDDAK-VKVDQEFELTRDPRGEIEYSPKVVNFSSVHHLTLYFPSNFGDDKTRIYYIGLRGEFSEAHYHGVTICNYEARANAADHKDKVFDGVG 207
BLAST of CB250248 vs. ExPASy Swiss-Prot
Match: CA128_MOUSE (UPF0424 protein C1orf128 homolog OS=Mus musculus GN=Trp26 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.293e-29 Identity = 70/163 (42.94%), Postives = 104/163 (63.80%), Query Frame = 1 Query: 19 VSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVVTIVYELRPNPSDHK 507 + LNE+ GS + VFK WE+R + S + +ES D D ELL IPFT +VK+K + I+G D + PS+MR++ N + F D + + Q + L ++ G LEY T+ S+F +V ++++H NFG DTT+I YIGL+GE T+L+R V YE NP+DH+ Sbjct: 40 LQCLNESREGSGRGVFKPWEERTDRS-KFVES-DADEELLFNIPFTGNVKLKGVIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPEQTFSLNRDITGELEYATKISRFSNVYHLSIHISKNFGADTTKIFYIGLRGEWTELRRHEVTICNYEASANPADHR 199
BLAST of CB250248 vs. ExPASy Swiss-Prot
Match: U424_DROME (UPF0424 protein CG6153 OS=Drosophila melanogaster GN=CG6153 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.761e-29 Identity = 73/171 (42.69%), Postives = 105/171 (61.40%), Query Frame = 1 Query: 19 VSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVVTIVYELRPNPSDHKTKSESGGG 531 V LNE G KSVFK +E+R + S +++ES D D ELL IPFT ++K+K I I G D + P+ +++F NR + F DA+ + QE+ L + +G +EY + F SV +++L+FP NFG D T+I+YIGL+GE T+ V YE R N +DHK K+ G G Sbjct: 40 VECLNEETDGQGKSVFKPYEKRQDLS-KYVES-DADEELLFNIPFTGNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDAR-AKPDQEFQLTRDARGEIEYSPKVVTFSSVHHLSLYFPSNFGEDITRIYYIGLRGEFTEAHYHGVTICNYESRANAADHKEKAFDGVG 207
BLAST of CB250248 vs. ExPASy Swiss-Prot
Match: CA128_XENLA (UPF0424 protein C1orf128 homolog OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.438e-28 Identity = 68/163 (41.72%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 19 VSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVVTIVYELRPNPSDHK 507 + LNE+ GS +SVF+AWE+R N +ES+D D ELL IPFT +VK+K I ++G T P+++R+F N + F D +A Q + L ++ G LEY T+ ++F +V+++++H NFG + T+I+YIGL+GE T+ R V YE NP+DHK Sbjct: 38 LQCLNESREGSGRSVFRAWEER-NDRTRFVESDD-DEELLFNIPFTGNVKLKGIVLIGEDSDTHPAELRLFKNVPHMSFDDT-GREADQTFSLNIDVNGNLEYPTKIARFSNVSHLSIHISKNFGAENTKIYYIGLRGEWTEAHRHEVTICNYEAAANPADHK 197
BLAST of CB250248 vs. ExPASy Swiss-Prot
Match: YOJ9_CAEEL (UPF0424 protein ZK353.9 OS=Caenorhabditis elegans GN=ZK353.9 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.696e-27 Identity = 69/165 (41.82%), Postives = 104/165 (63.03%), Query Frame = 1 Query: 19 VSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVVTIVYELRPNPSDHKTK 513 V+ LNE+V G+ K VFK E+R + E++ES D D ELL IPFT V++ +SI+G DG+ P+K+R+F +RE + F D ++A QE DL ++ QG+++Y + SKF ++ N+++ NFG D T+I+YIGL+GE R + YE R DHK + Sbjct: 37 VTTLNESVDGAGKKVFKVMEKR-DDRLEYVES-DCDHELLFNIPFTGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDDCS-IEADQEIDLKQDPQGLVDYPLKASKFGNIHNLSILVDANFGEDETKIYYIGLRGEFQHEFRQRIAIATYESRAQLKDHKNE 198
BLAST of CB250248 vs. ExPASy Swiss-Prot
Match: CA128_DANRE (UPF0424 protein C1orf128 homolog OS=Danio rerio GN=zgc:77241 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.932e-25 Identity = 65/166 (39.16%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 19 VSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVVTIVYELRPNPSDHKTKS 516 + LNE+ G K VFK W+QR + + + +ES D D ELL IPFT VK+K I I G D + P+++R+F N + F D + Q + L + + LEY T+ ++F +V ++++H NFG ++T+++YIGL+GE T+ R V YE NP+DHK +S Sbjct: 39 LQCLNESRDGDGKLVFKPWDQRTDRN-KFVES-DADEELLFNIPFTGSVKLKGIIISGEDDESHPAEIRLFKNIPQMSFDDTS-REPEQAFRLNRDPRAELEYPTKIARFSNVEHLSIHVSRNFGAESTRVYYIGLRGEYTEAHRHEVTICNYEAAANPADHKVES 201
BLAST of CB250248 vs. ExPASy Swiss-Prot
Match: YN82_SCHPO (UPF0424 protein P35G2.02 OS=Schizosaccharomyces pombe GN=SPBP35G2.02 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.097e-20 Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 19 VSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQG--VLEYQTRYSKFQSVANITLHFPDNFGG-DTTQIHYIGLKGEATQLKRDVVVTIVYELRPNPSDH 504 + LNEAVP S K VFK W+ R + + + +D D +LL +PF +KSI + + T+P +F NR +DF D+QA + ++ +G + E+ + +Q++ N+ + F + G D TQI YIGL+G K D VVTI YE P PSDH Sbjct: 33 IVTLNEAVPDSGKLVFKPWDLRYDDTD--IVESDADDQLLFQVPFAGAATLKSILVRIFPNETAPHSFSLFPNRTDLDFDTIGDVQATETFEFPLTFEGSHIFEFPVKTRLYQNLQNLNIFFTKSDGSDDPTQIAYIGLRGSFVPFKGDPVVTI-YEATPRPSDH 194 The following BLAST results are available for this feature:
BLAST of CB250248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB250248 ID=CB250248; Name=CB250248; organism=Citrus sinensis; type=EST; length=588bpback to top |