CB250249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7373_ARATH (UPF0737 protein AFP3 OS=Arabidopsis thaliana GN=AFP3 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.958e-35 Identity = 73/105 (69.52%), Postives = 84/105 (80.00%), Query Frame = 2 Query: 29 ATSEKSGKSMAVKSQWNKPTVAKKGVKEAVRDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYPIL 343 AT+ KS ++ +Q + K EA ++++EDMP VSTTGDGP+GK+I GFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP P L Sbjct: 131 ATTNKSVETSPSSAQSQPENLGK----EASQNIIEDMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPSPFL 231
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7372_WHEAT (UPF0737 protein 2 OS=Triticum aestivum GN=AFP-B1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.041e-28 Identity = 55/73 (75.34%), Postives = 67/73 (91.78%), Query Frame = 2 Query: 119 RDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 337 + ++EDMP VS+ DGP+GK+I+GFLY+YRKGEEVRIVCVCHG+FL+PAEFVKHAGGGDV +PL+HIVVNP P Sbjct: 240 KSMMEDMPMVSSKVDGPNGKKIDGFLYKYRKGEEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPAP 312
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7371_WHEAT (UPF0737 protein 1 OS=Triticum aestivum GN=AFP-A1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.041e-28 Identity = 55/73 (75.34%), Postives = 67/73 (91.78%), Query Frame = 2 Query: 119 RDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 337 + ++EDMP VS+ DGP+GK+I+GFLY+YRKGEEVRIVCVCHG+FL+PAEFVKHAGGGDV +PL+HIVVNP P Sbjct: 239 KSMMEDMPMVSSKVDGPNGKKIDGFLYKYRKGEEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPSP 311
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7371_ORYSJ (UPF0737 protein Os03g0214200 OS=Oryza sativa subsp. japonica GN=Os03g0214200 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.041e-28 Identity = 58/80 (72.50%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 98 KGVKEAVRDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 337 K + + R ++++MPCV T G P+GKR+EGFLY+YRKGEEVRIVCVCHGSFL+PAEFVKHAGGGDVA+PL+HIVVNP P Sbjct: 319 KSMGDVERIMMQEMPCVCTKGL-PNGKRVEGFLYKYRKGEEVRIVCVCHGSFLTPAEFVKHAGGGDVANPLRHIVVNPIP 397
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7373_WHEAT (UPF0737 protein 3 OS=Triticum aestivum GN=AFP-D1 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.165e-28 Identity = 54/73 (73.97%), Postives = 66/73 (90.41%), Query Frame = 2 Query: 119 RDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 337 + ++EDMP VS+ DGP+ K+I+GFLY+YRKGEEVRIVCVCHG+FL+PAEFVKHAGGGDV +PL+HIVVNP P Sbjct: 234 KSMMEDMPIVSSKVDGPNSKKIDGFLYKYRKGEEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPSP 306
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7376_MAIZE (UPF0737 protein 6 OS=Zea mays PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.348e-27 Identity = 53/71 (74.65%), Postives = 65/71 (91.55%), Query Frame = 2 Query: 125 VLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 337 ++EDMP VS+ +GP+ +RI+GFLYRY+KGE+VRIVCVCHGSFL+PAEFVKHAGGGDV +PL+HIVVNP P Sbjct: 216 MMEDMPMVSSKVEGPNARRIDGFLYRYKKGEDVRIVCVCHGSFLTPAEFVKHAGGGDVPNPLRHIVVNPAP 286
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7372_ARATH (UPF0737 protein AFP2 OS=Arabidopsis thaliana GN=AFP2 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.348e-27 Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 2 Query: 26 VATSEKSGKSMAVKSQWNKPTVAKKGVKEAVRDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVN 328 V + K ++ K ++ +V +KG A L DMPCV T GDGP+G+R++G LY+Y KGEEVRI+C+CHGSFL+PAEFVKH GGGDV PL+HIVVN Sbjct: 242 VTRANKVNENENEKRVRSEDSVDRKGKGMATSTGLVDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCICHGSFLTPAEFVKHGGGGDVDRPLRHIVVN 342
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7372_ORYSJ (UPF0737 protein Os07g0602900 OS=Oryza sativa subsp. japonica GN=Os07g0602900 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.458e-27 Identity = 52/71 (73.24%), Postives = 65/71 (91.55%), Query Frame = 2 Query: 119 RDVLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP 331 + ++EDMP VS+ DGP+G++I+GFLY+YRK EEVRIVCVCHG+FL+PAEFVKHAGGGDV +PL+HIVVNP Sbjct: 243 KSMMEDMPMVSSRVDGPNGRKIDGFLYKYRKREEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNP 313
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7375_MAIZE (UPF0737 protein 5 OS=Zea mays PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.133e-25 Identity = 50/67 (74.63%), Postives = 60/67 (89.55%), Query Frame = 2 Query: 131 EDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNP 331 EDMP VS +GP G++ +GFLY+YRKGEEVRIVCVCHGSFL+PAEFV+HAGGG+V +PL+HIVVNP Sbjct: 235 EDMPMVSYKAEGPGGRKTDGFLYKYRKGEEVRIVCVCHGSFLTPAEFVEHAGGGEVPNPLRHIVVNP 301
BLAST of CB250249 vs. ExPASy Swiss-Prot
Match: U7373_ORYSJ (UPF0737 protein Os03g0419100 OS=Oryza sativa subsp. japonica GN=Os03g0419100 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.133e-25 Identity = 49/71 (69.01%), Postives = 63/71 (88.73%), Query Frame = 2 Query: 125 VLEDMPCVSTTGDGPDGKRIEGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPYP 337 ++ DMP VS+ +GP+G++I+GFLY+YRKGE+V I+CVCHG F SPAEFVKHAGGGDV++PL+HIVVNP P Sbjct: 233 IMMDMPMVSSKVEGPNGRKIDGFLYKYRKGEDVSIMCVCHGKFHSPAEFVKHAGGGDVSNPLRHIVVNPSP 303 The following BLAST results are available for this feature:
BLAST of CB250249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250249 ID=CB250249; Name=CB250249; organism=Citrus sinensis; type=EST; length=656bpback to top |