CB250266

Overview
NameCB250266
Unique NameCB250266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig112 contig Csv1_Contig112:1..439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACOC_ORYSJ (Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 9.470e-71
Identity = 123/146 (84.25%), Postives = 139/146 (95.21%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKACELGLEVKPW+KTSLAPGSGVVTKYL  SGLQ+YLN  GFH+VGYGCTTCIGNSGD+D++V+AAI+END+VAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFE EP+GVGKDGK++F RDIWPS+EE+A V
Sbjct:  458 KKACELGLEVKPWVKTSLAPGSGVVTKYLLQSGLQEYLNKQGFHVVGYGCTTCIGNSGDLDESVSAAISENDVVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGVGKDGKEVFFRDIWPSTEEIAEV 603          
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACO1_ARATH (Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 1.786e-69
Identity = 124/146 (84.93%), Postives = 137/146 (93.84%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKAC+LGLEVKPWIKTSLAPGSGVVTKYL  SGLQKYLN LGF IVGYGCTTCIGNSGDI +AVA+AI +ND+VA+AVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFET+P+G GKDGK+IF RDIWPS++EVA V
Sbjct:  458 KKACDLGLEVKPWIKTSLAPGSGVVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVASAIVDNDLVASAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETQPIGTGKDGKQIFFRDIWPSNKEVAEV 603          
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACO2M_ARATH (Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 3.979e-69
Identity = 123/146 (84.25%), Postives = 138/146 (94.52%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKAC+LGL+VKPWIKTSLAPGSGVVTKYL  SGLQ+YLN  GF+IVGYGCTTCIGNSG+I+++V AAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+VNIDFETEP+G GK+GK +FLRDIWP++EE+A V
Sbjct:  550 KKACDLGLQVKPWIKTSLAPGSGVVTKYLLKSGLQEYLNEQGFNIVGYGCTTCIGNSGEINESVGAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVNIDFETEPIGKGKNGKDVFLRDIWPTTEEIAEV 695          
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMA (Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 6.787e-69
Identity = 121/146 (82.88%), Postives = 136/146 (93.15%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKACELGL+VKPW+KTSLAPGSGVVTKYL  SGLQ YLN  GFHIVGYGCTTCIGNSGD+D++V+AAI++NDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFE EP+G GKDGK ++ RDIWPS+EE+A V
Sbjct:  458 KKACELGLQVKPWVKTSLAPGSGVVTKYLLKSGLQPYLNQQGFHIVGYGCTTCIGNSGDLDESVSAAISDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGKGKDGKDVYFRDIWPSTEEIAEV 603          
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMC (Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.975e-68
Identity = 125/146 (85.62%), Postives = 135/146 (92.47%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKACELGLEVKPWIKT L    GVVTKYL  SGLQKYLN LGF+IVGYGCTTCIGNSGDID++VA+AIT NDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFE+EP+GVGKDGKK+F RDIWP+SEEVA V
Sbjct:  323 KKACELGLEVKPWIKTVLLQALGVVTKYLAKSGLQKYLNQLGFNIVGYGCTTCIGNSGDIDESVASAITGNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFESEPIGVGKDGKKVFFRDIWPTSEEVAVV 468          
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACOC_SOLTU (Aconitate hydratase, cytoplasmic (Fragment) OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 3.724e-67
Identity = 120/146 (82.19%), Postives = 135/146 (92.47%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKA ELGL VKPW+KTSLAPGSGVVTKYL  SGLQKYLN  GF+IVGYGCTTCIGNSGD+D++VA+AI+ENDIVAAAVLSGNRNFEGRVH LTRANYLASPPLVVAYALAG+V+IDFE +P+GVGKDGK ++ RDIWPS+EE+A V
Sbjct:  176 KKASELGLHVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNQQGFNIVGYGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKDPIGVGKDGKDVYFRDIWPSTEEIAEV 321          
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACO3M_ARATH (Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 3.160e-58
Identity = 107/146 (73.29%), Postives = 123/146 (84.25%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKA +LGL+VKPW+KTSLAPGS VV KYL  SGL++ L   GF IVGYGCTTCIGNSG++D  VA+AI   DI+ AAVLSGNRNFEGRVHP TRANYLASPPLVVAYALAG+V+IDFE EP+G   DGK ++LRD+WPS+EEVA V
Sbjct:  555 KKASDLGLKVKPWVKTSLAPGSRVVEKYLDRSGLRESLTKQGFEIVGYGCTTCIGNSGNLDPEVASAIEGTDIIPAAVLSGNRNFEGRVHPQTRANYLASPPLVVAYALAGTVDIDFEKEPIGTRSDGKSVYLRDVWPSNEEVAQV 700          
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACOC_CHICK (Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 1.468e-55
Identity = 101/146 (69.18%), Postives = 119/146 (81.51%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKA E GL VKP+IKTSL+PGSGVVT YL+ SG+  YL+ LGF +VGYGC TCIGNSG + D+V  AIT+ D+VA  VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AG+V IDFE EP+G+   GKKIFL+DIWP+  E+  V
Sbjct:  454 KKAVEAGLTVKPYIKTSLSPGSGVVTYYLRESGVMSYLSQLGFDVVGYGCMTCIGNSGPLPDSVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTVRIDFEKEPLGISASGKKIFLKDIWPTRNEIQAV 599          
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACOC_RAT (Cytoplasmic aconitate hydratase OS=Rattus norvegicus GN=Aco1 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 2.768e-54
Identity = 97/146 (66.44%), Postives = 119/146 (81.51%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKA E GL VKP++KTSL+PGSGVVT YL+ SG+  YL+ LGF +VGYGC TCIGNSG + + V  AIT+ D+VA  VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AG+V IDFE EP+GV   G+++FL+DIWP+ +E+  V
Sbjct:  454 KKAVEAGLNVKPYVKTSLSPGSGVVTYYLRESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTVRIDFEKEPLGVNAQGQQVFLKDIWPTRDEIQEV 599          
BLAST of CB250266 vs. ExPASy Swiss-Prot
Match: ACOC_MOUSE (Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 2.768e-54
Identity = 98/146 (67.12%), Postives = 119/146 (81.51%), Query Frame = 1
Query:    1 KKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFETEPVGVGKDGKKIFLRDIWPSSEEVAHV 438
            KKA E GL VKP+IKTSL+PGSGVVT YL+ SG+  YL+ LGF +VGYGC TCIGNSG + + V  AIT+ D+VA  VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AG+V IDFE EP+GV   G+++FL+DIWP+ +E+  V
Sbjct:  454 KKAVEAGLSVKPYIKTSLSPGSGVVTYYLRESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTVRIDFEKEPLGVNAQGRQVFLKDIWPTRDEIQAV 599          
The following BLAST results are available for this feature:
BLAST of CB250266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACOC_ORYSJ9.470e-7184.25Putative aconitate hydratase, cytoplasmic OS=Oryza... [more]
ACO1_ARATH1.786e-6984.93Aconitate hydratase 1 OS=Arabidopsis thaliana GN=A... [more]
ACO2M_ARATH3.979e-6984.25Aconitate hydratase 2, mitochondrial OS=Arabidopsi... [more]
ACOC_CUCMA6.787e-6982.88Aconitate hydratase, cytoplasmic OS=Cucurbita maxi... [more]
ACOC_CUCMC1.975e-6885.62Aconitate hydratase (Fragment) OS=Cucumis melo var... [more]
ACOC_SOLTU3.724e-6782.19Aconitate hydratase, cytoplasmic (Fragment) OS=Sol... [more]
ACO3M_ARATH3.160e-5873.29Aconitate hydratase 3, mitochondrial OS=Arabidopsi... [more]
ACOC_CHICK1.468e-5569.18Cytoplasmic aconitate hydratase OS=Gallus gallus G... [more]
ACOC_RAT2.768e-5466.44Cytoplasmic aconitate hydratase OS=Rattus norvegic... [more]
ACOC_MOUSE2.768e-5467.12Cytoplasmic aconitate hydratase OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionEST0036 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ045 similar to aconitase (acc# AAC26045), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250266 ID=CB250266; Name=CB250266; organism=Citrus sinensis; type=EST; length=439bp
AAGAAAGCATGTGAATTGGGATTGGAGGTCAAACCATGGATTAAAACAAG
CCTTGCTCCAGGATCTGGGGTTGTAACCAAGTATTTGCAGAACAGTGGCT
TGCAGAAATATTTGAATCACTTAGGGTTCCATATAGTTGGGTATGGATGC
ACCACTTGCATTGGGAACTCTGGAGATATTGATGATGCAGTAGCAGCAGC
TATTACTGAAAATGATATTGTCGCGGCAGCTGTGTTGTCTGGAAATAGGA
ATTTTGAGGGTCGTGTGCATCCTCTAACAAGGGCTAATTATCTTGCTTCA
CCTCCTCTTGTAGTTGCATATGCTCTGGCTGGCAGTGTCAATATTGATTT
TGAAACAGAACCCGTTGGGGTGGGGAAAGATGGAAAGAAGATCTTTCTCA
GGGACATCTGGCCATCCAGTGAAGAAGTAGCGCATGTCG
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