CB250267

Overview
NameCB250267
Unique NameCB250267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length388
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTM_ECOLI (3-mercaptopyruvate sulfurtransferase OS=Escherichia coli (strain K12) GN=sseA PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 5.019e-23
Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 3
Query:   12 EQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA--SGDAILKASAASEAIEKV 377
            E RN  QEY   HIPGA+FFD++ ++D T+ LPHMLP  E FA A+  LG+     L+VYD   +FS  R WWM R FG ++V +L GGL  W+     +E  A    +    A+   EA+ KV
Sbjct:   34 EDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKV 157          
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTM_ECO57 (3-mercaptopyruvate sulfurtransferase OS=Escherichia coli O157:H7 GN=sseA PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.019e-23
Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 3
Query:   12 EQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA--SGDAILKASAASEAIEKV 377
            E RN  QEY   HIPGA+FFD++ ++D T+ LPHMLP  E FA A+  LG+     L+VYD   +FS  R WWM R FG ++V +L GGL  W+     +E  A    +    A+   EA+ KV
Sbjct:   34 EDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKV 157          
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTR_CRIGR (Thiosulfate sulfurtransferase OS=Cricetulus griseus GN=TST PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.754e-21
Identity = 57/126 (45.24%), Postives = 72/126 (57.14%), Query Frame = 3
Query:   18 RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV--ESSASGDAILKASAASEAIEKVYQ 383
            R   +EYQ  H+PGA FFD++   D T+    MLPSE  FA  V +LG+ N   +VVYDG   G F   RVWWMFRVFGH  V VL+GG   W   G+ V  E S    A+ KA+    ++ K Y+
Sbjct:   42 RQARKEYQERHVPGASFFDIEECRDTTSPYEMMLPSEAHFADYVGSLGISNDTHVVVYDGDNLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKAT-LDRSLLKTYE 166          
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTR_CHICK (Thiosulfate sulfurtransferase OS=Gallus gallus GN=TST PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.754e-21
Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = 3
Query:    6 PDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV--ESSASGDAILKA 347
            P E+R+  QE++  HIPGA FF+++   D+++    MLPSE  FA  V  LG+ N   +VVYDG   G F   R WWMFR FGH  V VL+GG   W   G+ V  E S   +A+ KA
Sbjct:   37 PPEERDARQEFKERHIPGASFFNIEECRDKSSPYDFMLPSEAHFADYVGRLGVSNDTHVVVYDGDELGTFYAPRAWWMFRAFGHREVSVLNGGFKNWVKEGHPVTAEPSQPAEAVFKA 154          
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTM_SCHPO (Putative 3-mercaptopyruvate sulfurtransferase OS=Schizosaccharomyces pombe GN=SPCC4B3.01 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.046e-20
Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 3
Query:    3 MPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES 317
            +P + +N  +EY  + +PGA +FD+D   D    LPHMLP  + FA+ V  LG++    +++YD KG FS+ RV+W F+VFGH+ V++       W+  G ++E+
Sbjct:   37 LPTDTKNGKKEYLESRLPGAQYFDIDEAKDHKNPLPHMLPPADEFASYVGKLGIDRNTNVIIYDRKGFFSSPRVFWTFKVFGHEHVFLFPNAFNAWKTEGLELET 141          
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTR_RAT (Thiosulfate sulfurtransferase OS=Rattus norvegicus GN=Tst PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 1.367e-20
Identity = 56/126 (44.44%), Postives = 71/126 (56.35%), Query Frame = 3
Query:   18 RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV--ESSASGDAILKASAASEAIEKVYQ 383
            R   +EYQ  H+PGA FFD++   D T+    MLPSE  F   V  LG+ N   +VVYDG   G F   RVWWMFRVFGH  V VL+GG   W   G+ V  E S    A+ KA+  + ++ K Y+
Sbjct:   42 RQARKEYQERHVPGASFFDIEECRDTTSPYEMMLPSEAHFGDYVGNLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKAT-LNRSLLKTYE 166          
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTR_BOVIN (Thiosulfate sulfurtransferase OS=Bos taurus GN=TST PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 1.367e-20
Identity = 56/126 (44.44%), Postives = 72/126 (57.14%), Query Frame = 3
Query:   18 RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV--ESSASGDAILKASAASEAIEKVYQ 383
            R   +EY   H+PGA FFD++   D+ +    MLPSE  FA  V +LG+ N   +VVYDG   G F   RVWWMFRVFGH  V VL+GG   W   G+ V  E S    AI KA+  + ++ K Y+
Sbjct:   42 REARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKAT-LNRSLLKTYE 166          
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTM_HUMAN (3-mercaptopyruvate sulfurtransferase OS=Homo sapiens GN=MPST PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 1.367e-20
Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 3
Query:    3 MPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDA 335
            +P   R+  +E++  HIPGA FFD+D  +DRT+   HMLP  E FA     LG+     +V+YD   +G++S  RVWWMFR FGH  V +LDGGL  W      + S  S  A
Sbjct:   38 LPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGKSQPA 150          
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTM_RAT (3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus GN=Mpst PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 1.785e-20
Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 3
Query:    3 MPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS 326
            +P   R+  +E++  HIPGA FFD+D  +D T+   HMLPS   FA    +LG+     +V+YDG  +G++S  RVWWMFR FGH  V +LDGG   W +    + S  S
Sbjct:   38 LPKLGRDARREFEERHIPGAAFFDIDRCSDHTSPYDHMLPSATHFADYAGSLGVSAATHVVIYDGSDQGLYSAPRVWWMFRAFGHHSVSLLDGGFRYWLSQNLPISSGKS 147          
BLAST of CB250267 vs. ExPASy Swiss-Prot
Match: THTR_MOUSE (Thiosulfate sulfurtransferase OS=Mus musculus GN=Tst PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 2.331e-20
Identity = 54/115 (46.96%), Postives = 65/115 (56.52%), Query Frame = 3
Query:   18 RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSTARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV--ESSASGDAILKAS 350
            R   +EYQ  H+PGA FFD++   D T+    MLPSE  F   V  LG+ N   +VVYDG   G F   RVWWMFRVFGH  V VL+GG   W   G+ V  E S    A+ KA+
Sbjct:   42 RQARKEYQERHVPGASFFDIEECRDTTSPYEMMLPSEAHFGDYVGNLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAVFKAT 156          
The following BLAST results are available for this feature:
BLAST of CB250267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
THTM_ECOLI5.019e-2343.553-mercaptopyruvate sulfurtransferase OS=Escherichi... [more]
THTM_ECO575.019e-2343.553-mercaptopyruvate sulfurtransferase OS=Escherichi... [more]
THTR_CRIGR2.754e-2145.24Thiosulfate sulfurtransferase OS=Cricetulus griseu... [more]
THTR_CHICK2.754e-2144.92Thiosulfate sulfurtransferase OS=Gallus gallus GN=... [more]
THTM_SCHPO1.046e-2038.10Putative 3-mercaptopyruvate sulfurtransferase OS=S... [more]
THTR_RAT1.367e-2044.44Thiosulfate sulfurtransferase OS=Rattus norvegicus... [more]
THTR_BOVIN1.367e-2044.44Thiosulfate sulfurtransferase OS=Bos taurus GN=TST... [more]
THTM_HUMAN1.367e-2043.363-mercaptopyruvate sulfurtransferase OS=Homo sapie... [more]
THTM_RAT1.785e-2042.733-mercaptopyruvate sulfurtransferase OS=Rattus nor... [more]
THTR_MOUSE2.331e-2046.96Thiosulfate sulfurtransferase OS=Mus musculus GN=T... [more]

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Properties
Property NameValue
Genbank descriptionEST0038 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ049 similar to thiosulfate sulfurtransferase (acc# AAD19957), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250267 ID=CB250267; Name=CB250267; organism=Citrus sinensis; type=EST; length=388bp
ACATGCCAGATGAACAGAGGAACCCTTTTCAAGAGTATCAGGTTGCTCAT
ATTCCCGGTGCTCTTTTCTTTGATGTGGATGGTGTAGCAGATCGAACTAC
AAATTTGCCCCACATGTTACCTTCAGAGGAAGCTTTTGCTGCTGCTGTTT
CTGCCCTTGGCTTAGAGAATAAAGATGGGCTAGTTGTTTATGATGGGAAG
GGGATTTTTAGTACTGCTCGTGTCTGGTGGATGTTCCGAGTCTTTGGGCA
TGACAGAGTTTGGGTGTTAGATGGAGGCCTGCCAAGATGGCGTGCTTCTG
GATATGATGTTGAATCTAGTGCTTCTGGTGACGCTATTTTGAAAGCTAGT
GCTGCAAGTGAGGCAATAGAGAAAGTATATCAGGGACA
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