CB250276

Overview
NameCB250276
Unique NameCB250276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length382
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB250276 vs. ExPASy Swiss-Prot
Match: ANTA_GENTR (Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.520e-11
Identity = 47/131 (35.88%), Postives = 66/131 (50.38%), Query Frame = 2 
Query:    2 RVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVITSALMWVYMIELQE---SESEITGGDMIYHFVPVADCRERFEFPIPASYFGNCLAFLFISTKRSELMGKEGVVFAAKAIGRKIGEL---EKGAL 376
            R T V S  +I KLK +V   +R   E   RV+TF +T   +W  M++ ++   SE      + + +F   ADCR     P P +YFGNCLA         EL+G +G++ A  AIG  I +    EKG L
Sbjct:  250 RATYVLSLAEIQKLKNKV-LNLRGS-EPTIRVTTFTMTCGYVWTCMVKSKDDVVSEESSNDENELEYFSFTADCRGLLTPPCPPNYFGNCLASCVAKATHKELVGDKGLLVAVAAIGEAIEKRLHNEKGVL 378
The following BLAST results are available for this feature:
BLAST of CB250276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANTA_GENTR1.520e-1135.88Anthocyanin 5-aromatic acyltransferase OS=Gentiana... [more]
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Properties
Property NameValue
Genbank descriptionEST0049 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ063 similar to imported Arabidopsis protein (acc# D86166), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250276 ID=CB250276; Name=CB250276; organism=Citrus sinensis; type=EST; length=382bp
ACGGGTCACGTTGGTGCCGAGCCGTGACCAAATTGACAAACTGAAACAGA
GGGTCTCGGCTCAAATCAGAAGCGACGACGAATCACCGTCGCGTGTGTCA
ACGTTTGTGATAACTTCAGCTTTGATGTGGGTTTATATGATTGAGTTGCA
AGAGAGTGAAAGTGAAATTACTGGTGGTGACATGATTTACCATTTTGTCC
CTGTAGCGGACTGCAGAGAGCGGTTTGAGTTTCCAATACCGGCGAGTTAT
TTTGGGAATTGCCTGGCGTTTCTTTTTATATCAACTAAACGAAGTGAGCT
GATGGGGAAAGAGGGGGTTGTTTTTGCAGCCAAAGCTATTGGAAGAAAGA
TTGGTGAATTGGAGAAAGGGGCGTTAGTAGGG
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