CB250279

Overview
NameCB250279
Unique NameCB250279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5659 contig Csv1_Contig5659:110..840. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 5.347e-96
Identity = 169/218 (77.52%), Postives = 193/218 (88.53%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 656
            LYKKIFKA+F  PPWFS SAKKLI RILDPNP TRIT AEVIENEWFKKGYK P FE  ++ LDDVD+IF++S +S+NLVVERREEG   P+ MNAFELISTSQGLNL SLFEKQMGLVKR+TRFTSK   NEI++KIE AA+P+GFDVK NN+K+KL GEK+GRKG L+VATE+F+VAPSLYMVE+RKSGGDTLEFHKFYKNL+TGLKD+VWK+ DE
Sbjct:  240 LYKKIFKAEFTCPPWFSASAKKLIKRILDPNPATRITFAEVIENEWFKKGYKAPKFENADVSLDDVDAIFDDSGESKNLVVERREEGLKTPVTMNAFELISTSQGLNLGSLFEKQMGLVKRKTRFTSKSSANEIVTKIEAAAAPMGFDVKTNNYKMKLTGEKSGRKGQLAVATEVFQVAPSLYMVEMRKSGGDTLEFHKFYKNLTTGLKDIVWKTIDE 457          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.320e-86
Identity = 161/225 (71.56%), Postives = 184/225 (81.78%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQ-MGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWK------SGDE 656
            LYKKIFKADF  P WFSTSAKKLI +ILDPNP TRIT+AE+I NEWFKKGY+PP FE  +++LDD++SIFNES D   LVVERREE    P +MNAFELISTSQGLNL +LFEKQ  G VKRETRF S+ P NEI+SKIE AA P+GF+V+K N+KLKLQGE  GRKG L++ATE+FEV PSLYMVELRKS GDTLEFHKFY N+S GLKDV+WK      +GDE
Sbjct:  222 LYKKIFKADFSCPSWFSTSAKKLIKKILDPNPSTRITIAELINNEWFKKGYQPPRFETADVNLDDINSIFNESGDQTQLVVERREE---RPSVMNAFELISTSQGLNLGTLFEKQSQGSVKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHNISNGLKDVMWKPESSIIAGDE 443          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 4.706e-76
Identity = 138/217 (63.59%), Postives = 182/217 (83.87%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNIDL--DDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 647
            LYK+I KA+F  PPWFS  AK++I RIL+PNP+TRI++AE++E+EWFKKGYKPPSF+Q + D+  DDVD+ F+ S +   LV E++E+    P+ MNAFELIS+S   +L +LFEKQ  LVK+ETRFTS+R  +EI+SK+EE A PLGF+V+K+N+K+K++G+K+GRKG LSVATE+FEVAPSL++VELRK+GGDTLEFHKFYKN S+GLKDVVW +
Sbjct:  228 LYKRICKAEFSCPPWFSQGAKRVIKRILEPNPITRISIAELLEDEWFKKGYKPPSFDQDDEDITIDDVDAAFSNSKEC--LVTEKKEK----PVSMNAFELISSSSEFSLENLFEKQAQLVKKETRFTSQRSASEIMSKMEETAKPLGFNVRKDNYKIKMKGDKSGRKGQLSVATEVFEVAPSLHVVELRKTGGDTLEFHKFYKNFSSGLKDVVWNT 438          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.085e-72
Identity = 141/217 (64.98%), Postives = 172/217 (79.26%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQ-PNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQM-GLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 647
            LYK I KA    P WFS+ AKK I RILDPNP TRIT+A+++E++WFKK YKPP FEQ  ++ LDDVD+ F+ S +  NLV E+RE+    P  MNAF LIS SQG NL +LFEK+M G+VKRET FTS+    EI+SKIEEA  PLGF+V+K N+K+KL+G+KTGRKG+LSVATE+FEVAPSL+MVELRK+GGDTLEFH FY N S+ LKD+VWKS
Sbjct:  236 LYKLICKAKVSCPHWFSSGAKKFIKRILDPNPCTRITIAQILEDDWFKKDYKPPLFEQGEDVSLDDVDAAFDCSEE--NLVAEKREK----PESMNAFALISRSQGFNLGNLFEKEMMGMVKRETSFTSQCTPQEIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGYLSVATEVFEVAPSLHMVELRKTGGDTLEFHNFYNNFSSELKDIVWKS 446          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 3.267e-69
Identity = 135/218 (61.93%), Postives = 169/218 (77.52%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQP-NIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 653
            LYKKI  A+F  PPW S  AK+L++RILDPNP+TR+T+ E++E+EWFKKGYK P F++  +  LDDV ++FN+S +    V E++EE    P  +NAFELIS S GLNL +LF+ +    KRETRFTSK P  EI+ KIEEAA PLGFDV+K N+KL+L+  K GRKG+L+VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  222 LYKKISNAEFTFPPWTSFPAKRLLTRILDPNPMTRVTIPEILEDEWFKKGYKRPEFDEKYDTTLDDVYAVFNDSEEHH--VTEKKEE----PEALNAFELISMSAGLNLGNLFDSEQEF-KRETRFTSKCPPKEIVRKIEEAAKPLGFDVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 432          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.372e-67
Identity = 138/234 (58.97%), Postives = 170/234 (72.65%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQP-NIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNN----------------FKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 653
            LYKKI  A+F  PPW S  AK+L++RILDPNP+TRIT+ E++E+EWFKKGYK P F++  +  LDDVD++FN+S +    V E++EE    P  +NAFELIS S GLNL +LF+ +    KRETRFTSK P  EI+ KIEEAA PLGFDV+K N                FKL+L+  K GRKG+L+VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  222 LYKKISNAEFTFPPWTSFPAKRLLTRILDPNPMTRITIPEILEDEWFKKGYKRPEFDEKYDTTLDDVDAVFNDSEEHH--VTEKKEE----PEALNAFELISMSAGLNLGNLFDSEQEF-KRETRFTSKCPPKEIVRKIEEAAKPLGFDVQKKNYKICSPCLTTICMNIPFKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 448          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.058e-67
Identity = 131/219 (59.82%), Postives = 166/219 (75.80%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQP-NIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 656
            LYKKI +A F  P WFST AKKLI+RILDPNP TRIT+++++E+ WFKKGYKPP F++      DDVD+ F +S D    V E  E+ P +   MNAFELIS +Q LNL +LFE +    KRETRFTS+ P  EII+KIEEAA PLGFD++K N+K++++  K GRKG+L+VATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVWK   E
Sbjct:  229 LYKKISEAQFTCPSWFSTGAKKLITRILDPNPTTRITISQILEDPWFKKGYKPPVFDEKYETSFDDVDAAFGDSEDRH--VKEETEDQPTS---MNAFELISLNQALNLDNLFEAKKEY-KRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGE 441          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 1.517e-66
Identity = 128/218 (58.72%), Postives = 165/218 (75.69%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQ-PNIDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 653
            LYKKI   +F  PPW S  A KLI+RILDPNP+TR+T  EV E+EWFKK YKPP FE+  + ++DD+D++F +S +  +LV E+REE P A   +NAFE+IS S+GLNL +LF+ +    KRETR T +   NEII KIEEAA PLGFDV+K N+K++L+  K GRKG+L+VATEIF+VAPSL+MV++ KS GDTLEFHKFYK LS  L+ VVW + +
Sbjct:  223 LYKKISSGEFNCPPWLSLGAMKLITRILDPNPMTRVTPQEVFEDEWFKKDYKPPVFEERDDSNMDDIDAVFKDSEE--HLVTEKREEQPAA---INAFEIISMSRGLNLENLFDPEQEF-KRETRITLRGGANEIIEKIEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEIFQVAPSLHMVQVSKSKGDTLEFHKFYKKLSNSLEQVVWTNNE 434          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPKQ_ARATH (CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 4.415e-66
Identity = 125/220 (56.82%), Postives = 165/220 (75.00%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPN-IDLDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDET 659
            LYKKI   ++  PPW S  AK LI RILDPNP+TRIT+ EV+ + WFKK YKP  FE+    +LDDVD++F +S +    V E++EE P +   MNAFELIS S+ L+L +LFE++ G  KRETRF +K   N+++ KIEEA+ PLGFD++K N+K++L+    GRKG+L VATEIF+V+PSL+M+E+RK+ GDTLEFHKFYK LST L DVVWKSG+ +
Sbjct:  222 LYKKIIAGEYHCPPWLSPGAKNLIVRILDPNPMTRITIPEVLGDAWFKKNYKPAVFEEKEEANLDDVDAVFKDSEEHH--VTEKKEEQPTS---MNAFELISMSRALDLGNLFEEEEGF-KRETRFAAKGAANDLVQKIEEASKPLGFDIQKKNYKMRLENVTAGRKGNLRVATEIFQVSPSLHMIEVRKTKGDTLEFHKFYKKLSTSLNDVVWKSGESS 435          
BLAST of CB250279 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.917e-59
Identity = 118/218 (54.13%), Postives = 157/218 (72.02%), Query Frame = 3
Query:    3 LYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPSFEQPNID-LDDVDSIFNESMDSRNLVVERREEGPVAPLIMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 653
            LY KI  A F  P WFS  AK+LI+RILDPNP TRIT ++V++++WFKKGY+ P F+        DV   F +S +    V E  EE P    +MNAFELIS ++GLNL + FE      KRETRFTS+ P  EII++IEEAA+ LGF+++K N++++++  K GRKGHL++ATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVW+  D
Sbjct:  228 LYNKISGAQFTCPSWFSAEAKRLIARILDPNPATRITTSQVLQDQWFKKGYESPVFDDKYYPYFHDVYDAFGDSEEKH--VKEAMEEQPT---LMNAFELISLNKGLNLDNFFESDKKY-KRETRFTSQCPPKEIINRIEEAANLLGFNIQKRNYRMRMENIKEGRKGHLNIATEVFQVAPSLHVVELKKAKGDTLEFQKFYQTLSTQLKDVVWELED 439          
The following BLAST results are available for this feature:
BLAST of CB250279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
CIPKN_ARATH5.347e-9677.52CBL-interacting serine/threonine-protein kinase 23... [more]
CIPKN_ORYSJ1.320e-8671.56CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPK9_ARATH4.706e-7663.59CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPK9_ORYSJ1.085e-7264.98CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]
CIPKW_ORYSJ3.267e-6961.93CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPKX_ORYSJ1.372e-6758.97CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPKV_ORYSJ3.058e-6759.82CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
CIPK3_ARATH1.517e-6658.72CBL-interacting serine/threonine-protein kinase 3 ... [more]
CIPKQ_ARATH4.415e-6656.82CBL-interacting serine/threonine-protein kinase 26... [more]
CIPK3_ORYSJ8.917e-5954.13CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionEST0053 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ069 similar to serine/threonine protein kinase (acc# AAG50566), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250279 ID=CB250279; Name=CB250279; organism=Citrus sinensis; type=EST; length=731bp
CTTTATATAAGAAGATATTTAAGGCTGACTTCAAGAGTCCTCCATGGTTC
TCGACAAGTGCAAAGAAACTGATCTCAAGAATTTTGGACCCTAATCCTGT
GACACGAATAACGATGGCTGAGGTTATTGAGAATGAGTGGTTTAAGAAGG
GATATAAGCCACCTAGTTTTGAACAACCTAATATTGATCTTGATGATGTG
GATTCTATCTTTAATGAATCGATGGATTCTCGAAACCTTGTTGTGGAGAG
GCGAGAAGAAGGCCCTGTTGCACCTCTCATTATGAATGCGTTTGAGTTGA
TCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAAAAGCAAATG
GGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCCTGTTAACGA
AATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTTTTGATGTGA
AGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACTGGACGCAAG
GGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCCTTCACTTTA
CATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAATTTCACAAGT
TTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGGAAATCAGGA
GATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGCAGGGTCTCA
ATAGCGGATTTCCTTTCATGACTTGCACTGC
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