CB250282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2) HSP 1 Score: 296.59 bits (758), Expect = 4.787e-80 Identity = 136/175 (77.71%), Postives = 161/175 (92.00%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKNV 525 A+Y FNVM+KY + NL AFNGLLSALCKSKNVRKAQE+F+ M DRF PDSKTYSILLEGWGK+PNLP+ARE+FREM+D GC+PDIVTY IMVD+LCKAGRVDEALGIV+SMD +C+PT+FIYSVLVHTYG ENR+E+AVDTFLEME++G++ADVA++N+LIGAFCKAN+ KNV Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNV 361
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.971e-33 Identity = 68/175 (38.86%), Postives = 109/175 (62.29%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMND-RFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKN 522 A+ F+ M+++G + FN +L L KS+NV AQ++FD M RF PD K+Y+ILLEGWG++ NL R E+ REM D G PD+V YGI+++ CKA + +EA+ M+ C+P+ I+ L++ G E ++ DA++ F + +G + YNAL+GA+C + + ++ Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMED 355
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.726e-29 Identity = 66/174 (37.93%), Postives = 98/174 (56.32%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKN 522 AV F M ++G Q+LA+FN +L LCKSK V KA E+F + RF D+ TY+++L GW P+A E+ +EMV+ G NP++ TY M+ +AG++ A M C+ Y+ +VH +GV I+ A + F EM + G+ VA YNA+I CK + +N Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318 HSP 2 Score: 82.8037 bits (203), Expect = 1.086e-15 Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAV---DTFLEMEKNG 453 F+ M + GV ++A +N ++ LCK NV A +F+ M R + P+ TY++L+ G R E+ + M + GC P+ TY +M+ + V++ALG+ + M S C P Y++L+ V R ED V LEM + G Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERG 438 HSP 3 Score: 77.0258 bits (188), Expect = 5.961e-14 Identity = 46/172 (26.74%), Postives = 78/172 (45.35%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 A+ M + G+ NL +N +L ++ +R A E F M R D TY+ ++ G+G + RAR +F EM+ G P + TY M+ VLCK V+ A+ + + M +P Y+VL+ + ME G + + YN +I + + ++ Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.369e-25 Identity = 55/174 (31.61%), Postives = 92/174 (52.87%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKN 522 AV+ FN M+ YG + AF+ ++S L + + +AQ FD + DRF PD Y+ L+ GW + + A ++F+EM G P++ TY I++D LC+ G++ A + M C P + ++ L+ + R E + + +M+K G + D YN LI A C+ +N Sbjct: 205 AVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLEN 378
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.672e-24 Identity = 57/169 (33.73%), Postives = 98/169 (57.99%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTY-GVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504 AV + M KYG+ + F LL ALCK+ +V++A ++F+ M ++F P+ + ++ LL GW ++ L A+E+ +M + G PDIV + ++ AG++ +A ++ M +P Y+VL+ E R+++A+ F+EME+ G +AD+ Y ALI FCK Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354 HSP 2 Score: 77.0258 bits (188), Expect = 5.961e-14 Identity = 41/168 (24.40%), Postives = 82/168 (48.81%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGK-DPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 M++ G+ ++ F LLS + + A ++ + M R F P+ Y++L++ + + + A +F EM GC DIVTY ++ CK G +D+ ++ M P+ Y ++ + + + E+ ++ +M++ G D+ +YN +I CK + K Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429 HSP 3 Score: 71.633 bits (174), Expect = 2.505e-12 Identity = 37/153 (24.18%), Postives = 73/153 (47.71%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGI 456 A+ F M++YG ++ + L+S CK + K + D M + + P TY ++ K E+ +M GC+PD++ Y +++ + CK G V EA+ + M++ P + ++++ + + + +A + F EM GI Sbjct: 326 AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.416e-23 Identity = 54/164 (32.93%), Postives = 91/164 (55.49%), Query Frame = 1 Query: 16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504 +V+ + V+ ++ +N +L +LC S +++A E+ D M R PD TY+IL+E +D + A ++ EM D GC PD+VTY ++V+ +CK GR+DEA+ + M S CQP +++++ + R DA +M + G V +N LI C+ Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356 HSP 2 Score: 95.1301 bits (235), Expect = 2.115e-19 Identity = 51/172 (29.65%), Postives = 91/172 (52.91%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 A+ M ++G N ++N LL CK K + +A E + M R PD TY+ +L KD + A EI ++ GC+P ++TY ++D L KAG+ +A+ ++ M + +P + YS LV E ++++A+ F E E+ GI+ + +N+++ CK+ + Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534 HSP 3 Score: 93.2041 bits (230), Expect = 8.038e-19 Identity = 50/165 (30.30%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 M + G + ++ FN L++ LC+ + +A +I + M P+S +Y+ LL G+ K+ + RA E MV GC PDIVTY M+ LCK G+V++A+ I+ + S C P Y+ ++ + A+ EM ++ D Y++L+G + K Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499 HSP 4 Score: 87.4261 bits (215), Expect = 4.411e-17 Identity = 43/172 (25.00%), Postives = 84/172 (48.84%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKF 516 A +++ G ++ +N ++S CK+ + A + D M+ PD TY+ +L L +A E+ M+ C PD++TY I+++ C+ V A+ ++ M C P Y+VLV+ E R+++A+ +M +G Q +V +N ++ + C ++ Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325 HSP 5 Score: 86.2705 bits (212), Expect = 9.826e-17 Identity = 45/175 (25.71%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-NDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKN 522 A+ + M+ G T ++ +N L++ +CK + +A + + M + P+ T++I+L A ++ +M+ G +P +VT+ I+++ LC+ G + A+ I++ M CQP S Y+ L+H + E +++ A++ M G D+ YN ++ A CK K ++ Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432 HSP 6 Score: 75.485 bits (184), Expect = 1.734e-13 Identity = 44/172 (25.58%), Postives = 81/172 (47.09%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 A+ N M G N+ N +L ++C + A+++ D + F P T++IL+ + L RA +I +M GC P+ ++Y ++ CK ++D A+ ++ M S C P Y+ ++ + ++EDAV+ ++ G + YN +I KA K Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464 HSP 7 Score: 67.781 bits (164), Expect = 3.616e-11 Identity = 40/153 (26.14%), Postives = 75/153 (49.02%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGI 456 AV N + G + L +N ++ L K+ KA ++ D M + + PD+ TYS L+ G ++ + A + F E G P+ VT+ ++ LCK+ + D A+ + M + C+P Y++L+ E ++A++ E+ G+ Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.119e-23 Identity = 59/172 (34.30%), Postives = 91/172 (52.91%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKNV 525 F M+ G+ ++ +N LLSA +A+ +F MND +PD TYS L+E +GK L + ++ EM G PDI +Y ++++ K+G + EA+G+ M + C P + YSVL++ +G R +D FLEM+ + D A YN LI F + FK V Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406 HSP 2 Score: 79.7221 bits (195), Expect = 9.197e-15 Identity = 41/166 (24.70%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-NDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGA 495 A F M G+ +L ++ L+ K + + K ++ M + +PD +Y++LLE + K ++ A +F +M GC P+ TY +++++ ++GR D+ + M S P + Y++L+ +G ++ V F +M + I+ D+ Y +I A Sbjct: 266 AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431 HSP 3 Score: 75.0998 bits (183), Expect = 2.265e-13 Identity = 48/171 (28.07%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-NDRFIPDSKTYSILLEGWGKDP-NLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 F+ M GV++++ ++ L++A ++ + E+ D M N++ P TY+ ++ + + +F EM G PDIVTY ++ G DEA + ++M+ P YS LV T+G R+E D EM G D+ YN L+ A+ K+ K Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIK 334 HSP 4 Score: 67.0106 bits (162), Expect = 6.169e-11 Identity = 43/174 (24.71%), Postives = 85/174 (48.85%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 A+ F+ MQ G T N ++ LL+ +S +++F + + PD+ TY+IL+E +G+ +F +MV+ PD+ TY ++ K G ++A I++ M + P+S Y+ ++ +G E+A+ F M + G + +++L+ +F + K Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 509
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PPR36_ARATH (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.025e-23 Identity = 53/168 (31.55%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIF-DCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 FN M+ G+T N+ +N L+ C + ++ D + + P+ T+S+L++ + K+ L A E+ +EM+ G PD +TY ++D CK +D+A +V M S C P +++L++ Y NRI+D ++ F +M G+ AD YN LI FC+ K Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453 HSP 2 Score: 97.0561 bits (240), Expect = 5.567e-20 Identity = 54/171 (31.58%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKAN 510 A+ + M +YG N + +L+ +CKS A E+ M +R I D+ YSI+++G K +L A +F EM G +I+TY I++ C AGR D+ +++ M P +SVL+ ++ E ++ +A + EM GI D Y +LI FCK N Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382 HSP 3 Score: 97.0561 bits (240), Expect = 5.567e-20 Identity = 52/164 (31.71%), Postives = 92/164 (56.10%), Query Frame = 1 Query: 16 NVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCK 504 ++M G N+ FN L++ CK+ + E+F M+ R + D+ TY+ L++G+ + L A+E+F+EMV P+IVTY I++D LC G ++AL I + ++ + IY++++H ++++DA D F + G++ V YN +IG CK Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555 HSP 4 Score: 88.9669 bits (219), Expect = 1.516e-17 Identity = 50/164 (30.49%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 28 KYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKF 516 K G N F+ L++ LC V +A E+ D M + PD T + L+ G A + +MV+ GC P+ VTYG +++V+CK+G+ A+ +++ M+ + + YS+++ +++A + F EME GI ++ YN LIG FC A ++ Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314 HSP 5 Score: 83.5741 bits (205), Expect = 6.369e-16 Identity = 45/161 (27.95%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFC 501 M K + N+ F+ L+ + K +R+A+E+ M R I PD+ TY+ L++G+ K+ +L +A ++ MV GC+P+I T+ I+++ CKA R+D+ L + + M + Y+ L+ + ++ A + F EM + ++ Y L+ C Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484 HSP 6 Score: 82.0333 bits (201), Expect = 1.853e-15 Identity = 43/161 (26.71%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 34 GVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 G+ + + L+ CK ++ KA ++ D M + P+ +T++IL+ G+ K + E+FR+M G D VTY ++ C+ G+++ A + + M S P Y +L+ E A++ F ++EK+ ++ D+ +YN +I C A+K Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523 HSP 7 Score: 72.0182 bits (175), Expect = 1.918e-12 Identity = 42/171 (24.56%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMND----RFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKN 522 M+ G+ NL + +++ C+ + + A F M + P++ T+S L+ G + + A E+ MV+ G PD++T +V+ LC +G+ EA+ ++ M CQP + Y +++ + A++ +ME+ I+ D Y+ +I CK N Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281 HSP 8 Score: 69.707 bits (169), Expect = 9.517e-12 Identity = 46/162 (28.40%), Postives = 79/162 (48.77%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDS-KTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGA 495 F M GV + +N L+ C+ + A+E+F M R +P + TY ILL+G + +A EIF ++ + DI Y I++ +C A +VD+A + S+ +P Y++++ + + +A F +ME++G D YN LI A Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.175e-23 Identity = 56/175 (32.00%), Postives = 98/175 (56.00%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKNV 525 AV F +M+KY + N LL +L ++K ++AQ +FD + +RF P+ TY++LL GW + NL A I+ +M+D G PDIV + +M++ L ++ + +A+ + M S P Y++++ + ++ +E A++ F +M +G+Q D A+Y LI F K V Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422 HSP 2 Score: 71.2478 bits (173), Expect = 3.271e-12 Identity = 44/164 (26.83%), Postives = 77/164 (46.95%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALI 489 A+ F+VM+ G N+ ++ ++ CK ++ A E FD M D + PD+ Y+ L+ G+G L E+ +EM + G PD TY ++ ++ + A I M +P+ +++++ +Y + E + EM K GI D Y LI Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
BLAST of CB250282 vs. ExPASy Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.175e-23 Identity = 56/175 (32.00%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 1 AVYTFNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFKN 522 AV + M + N +N L+S LCK V +A E+ + + +PD T++ L++G N A E+F EM GC PD TY +++D LC G++DEAL ++K M+ C + Y+ L+ + N+ +A + F EME +G+ + YN LI CK+ + ++ Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523 HSP 2 Score: 96.2857 bits (238), Expect = 9.495e-20 Identity = 53/165 (32.12%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 13 FNVMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCM-NDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEM-EKNGIQADVAMYNALIGAFC 501 F+ M+ +GV++N +N L+ LCKS+ V A ++ D M + PD TY+ LL + + ++ +A +I + M GC PDIVTYG ++ LCKAGRV+ A +++S+ T Y+ ++ + + +A++ F EM E+N D Y + C Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657 HSP 3 Score: 92.4337 bits (228), Expect = 1.371e-18 Identity = 54/188 (28.72%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 58 FNGLLSALCKSKNVRKAQEIFDCM-NDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDE-----------------------------------ALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 FN L++ LCK+ +V+ A EI D M + + PD TY+ ++ G K + A E+ +M+ C+P+ VTY ++ LCK +V+E A+ + + M S C+P F Y++L+ + + ++++A++ +ME +G V YN LI FCKANK Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485 HSP 4 Score: 91.6633 bits (226), Expect = 2.339e-18 Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMN--DRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFC 501 M ++G + + + N ++ CK V A M+ D F PD T++ L+ G K ++ A EI M+ G +PD+ TY ++ LCK G V EA+ ++ M + C P + Y+ L+ T EN++E+A + + GI DV +N+LI C Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411 HSP 5 Score: 88.1965 bits (217), Expect = 2.586e-17 Identity = 49/168 (29.17%), Postives = 81/168 (48.21%), Query Frame = 1 Query: 19 VMQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFI-PDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 V+ G+ ++ FN L+ LC ++N R A E+F+ M + PD TY++L++ L A + ++M +GC ++TY ++D CKA + EA I M+ S Y+ L+ R+EDA +M G + D YN+L+ FC+ K Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557 HSP 6 Score: 85.8853 bits (211), Expect = 1.283e-16 Identity = 47/168 (27.98%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDR-FIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSM-VCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANKFK 519 M +G+ +++ FN L+ ALC++ +R A + + M +PD KT++ +++G+ ++ +L A I +MV+ GC+ V+ ++V CK GRV++AL ++ M + P + ++ LV+ ++ A++ M + G DV YN++I CK + K Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347 HSP 7 Score: 79.7221 bits (195), Expect = 9.197e-15 Identity = 46/165 (27.88%), Postives = 79/165 (47.88%), Query Frame = 1 Query: 22 MQKYGVTQNLAAFNGLLSALCKSKNVRKAQEIFDCMNDRFIP-DSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGIMVDVLCKAGRVDEALGIVKSMDSMVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNGIQADVAMYNALIGAFCKANK 513 M+ G +++ +N L+ CK+ R+A+EIFD M + +S TY+ L++G K + A ++ +M+ G PD TY ++ C+ G + +A IV++M S C+P Y L+ R+E A ++ GI YN +I + K Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625 The following BLAST results are available for this feature:
BLAST of CB250282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250282 ID=CB250282; Name=CB250282; organism=Citrus sinensis; type=EST; length=525bpback to top |