CB250284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_DESHY (Methylthioribose-1-phosphate isomerase OS=Desulfitobacterium hafniense (strain Y51) GN=mtnA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.491e-34 Identity = 79/130 (60.77%), Postives = 92/130 (70.77%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 +D IP LM+ G + VIVGADR+AANGDTANKIGTYSLA+ A H I FYVAAP ++IDL + SGQ+I IEER+ KEL R G QVA + V+NPAFDVTPA LITGIITEKG+VT Sbjct: 205 NDHIPVTLIADNMAGFLMQQGNIDLVIVGADRIAANGDTANKIGTYSLAVLAHAHGIPFYVAAPTSTIDLKVPSGQDIPIEERNPKEL---REVFGVQVAPPEVPVYNPAFDVTPAKLITGIITEKGIVT 331
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_DESHD (Methylthioribose-1-phosphate isomerase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=mtnA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.491e-34 Identity = 79/130 (60.77%), Postives = 92/130 (70.77%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 +D IP LM+ G + VIVGADR+AANGDTANKIGTYSLA+ A H I FYVAAP ++IDL + SGQ+I IEER+ KEL R G QVA + V+NPAFDVTPA LITGIITEKG+VT Sbjct: 205 NDHIPVTLIADNMAGFLMQQGNIDLVIVGADRIAANGDTANKIGTYSLAVLAHAHGIPFYVAAPTSTIDLKVPSGQDIPIEERNPKEL---REVFGVQVAPPEVPVYNPAFDVTPAKLITGIITEKGIVT 331
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_XENLA (Methylthioribose-1-phosphate isomerase OS=Xenopus laevis GN=mri1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.649e-33 Identity = 75/128 (58.59%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 385 +++IP M++ +V+AV+VGADRV ANGDTANKIGTY LA+ AK+H I FYVAAP TS DL+L +G IVIEER + EL G ++AA GI VWNPAFDVTP LITGIITE+GV Sbjct: 216 YEKIPATLITDSMASVTMRERKVTAVVVGADRVVANGDTANKIGTYQLAIIAKYHGIPFYVAAPSTSCDLSLPTGGSIVIEERPSHELTDIN---GIRIAAPGIDVWNPAFDVTPHELITGIITERGV 340
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_XENTR (Methylthioribose-1-phosphate isomerase OS=Xenopus tropicalis GN=mri1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.813e-33 Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 385 +++IP ++D +V+AV+VGADRV ANGDTANKIGTY LA+ A++H I FYVAAP TS DL+L +G IVIEER + EL G ++AA GI VWNPAFDVTP LITGIITE+GV Sbjct: 216 YEKIPATLITDSMASAAIRDRKVTAVVVGADRVVANGDTANKIGTYQLAITARYHGIPFYVAAPSTSCDLSLPTGGSIVIEERPSHELTDIN---GVRIAAPGIGVWNPAFDVTPHELITGIITERGV 340
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_SOLUE (Methylthioribose-1-phosphate isomerase OS=Solibacter usitatus (strain Ellin6076) GN=mtnA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.062e-32 Identity = 72/127 (56.69%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 385 D IP MK GR+ V+VGADR+AANGD ANK+GTYS+A+ AK + + FYVAAP++++DLTLSSG++I IEERSA E+ G VA +G +V NPAFDVTPA +TGIITEKGV Sbjct: 204 DSIPTTLITDNMAGHFMKAGRIGCVVVGADRIAANGDVANKVGTYSVAVLAKENGVPFYVAAPISTLDLTLSSGEQIPIEERSAAEV---THVFGHAVAPAGTAVKNPAFDVTPARYVTGIITEKGV 327
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_PELTS (Methylthioribose-1-phosphate isomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=mtnA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.048e-32 Identity = 68/113 (60.18%), Postives = 87/113 (76.99%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 L+ G+ V+VGADR+AANGD ANKIGTYSLA+ A+ H I FYVAAP+++IDL+L+SG+EI IEER + E+ G VA G++VWNPAFDVTPA LIT IIT++G+V Sbjct: 223 LLAKGKADLVVVGADRIAANGDVANKIGTYSLAVLAREHKIPFYVAAPVSTIDLSLASGEEIPIEERDSSEVTHL---AGRPVAPEGVNVWNPAFDVTPARLITAIITDRGIV 332
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_RHOBA (Methylthioribose-1-phosphate isomerase OS=Rhodopirellula baltica GN=mtnA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.633e-31 Identity = 69/115 (60.00%), Postives = 84/115 (73.04%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 394 LM+ GRV AVIVGADR+AANGD ANKIGTY LA+ AK+HNI FYVAAP + D L SG I IE+RSA E+ G + G++V NPAFDVTPA L+T +ITEKGV+++ Sbjct: 230 LMRQGRVDAVIVGADRIAANGDVANKIGTYPLAVLAKYHNIPFYVAAPTNTFDSELESGDLIPIEQRSADEVSYPCGTDSPRQTPEGVAVVNPAFDVTPAELVTALITEKGVISE 344
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_GEOMG (Methylthioribose-1-phosphate isomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=mtnA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.491e-31 Identity = 72/129 (55.81%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 DRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVT 391 D IP MK G ++ +VGADR+AANGDTANKIGTYS+A+ AK +NI FYVAAP +++DL+L +G +I IEER A+E+ + G VA GI+V NPAFDVTPA I GIITEKGV+T Sbjct: 208 DGIPVTLISDNMAGFFMKRGEITCCVVGADRIAANGDTANKIGTYSVAVLAKENNIPFYVAAPTSTLDLSLENGDQIPIEERHAREVTHLQ---GLPVAPEGIAVRNPAFDVTPARYIAGIITEKGVIT 333
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_FERNB (Methylthioribose-1-phosphate isomerase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=mtnA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.491e-31 Identity = 69/114 (60.53%), Postives = 91/114 (79.82%), Query Frame = 2 Query: 50 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELL-CSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 388 +MK G+++AVIVGADR+AANGD ANKIGTY +A+ A H I FYVAAPL++ID+++ SG+EI IEERS +E+L C G++VA + ++V+NPAFDVT L+T IITEKGVV Sbjct: 225 VMKQGKINAVIVGADRIAANGDVANKIGTYMVAVLANRHGIPFYVAAPLSTIDMSIKSGKEIPIEERSHEEVLTCG----GKRVAPNNVNVYNPAFDVTDHELVTAIITEKGVV 334
BLAST of CB250284 vs. ExPASy Swiss-Prot
Match: MTNA_RAT (Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus GN=Mri1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.865e-31 Identity = 76/129 (58.91%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 2 HDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLIT-GIITEKGV 385 +++IP M VSAV+VGADRV ANGDTANKIGTY LA+ AK H I FYVAAP +S DL L +G+EIVIEER ++EL G ++AA GI VWNPAFDVTP LIT GIITE GV Sbjct: 218 YEKIPATLITDSMAAAAMVHQGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHHGIPFYVAAPSSSCDLRLETGKEIVIEERPSQELTDLN---GVRIAAQGIRVWNPAFDVTPHELITGGIITELGV 343 The following BLAST results are available for this feature:
BLAST of CB250284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250284 ID=CB250284; Name=CB250284; organism=Citrus sinensis; type=EST; length=490bpback to top |