CB250295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 79/202 (39.11%), Postives = 119/202 (58.91%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM-GTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +WS Y ++ ++V+K GLKL + FH IPLP WV IGES IFYT++SG + + LS+ VD+ P+ G+T I++Y ++ +SF+ + + I I +GLGP GELRYPS+ + + + PG+GEFQC D+ + + A G+ W L P DA +Y++ P S FFK N G++ + G FFL+W Sbjct: 69 DWSAYKSLFQLVQKCGLKLQAIMSFHQCGGNVGDVVNIPLPKWVLDIGESDPDIFYTNRSGIRNQEYLSIGVDNKPIFHGRTAIEIYSDYMKSFRENMSDLLKSEVIIDIEVGLGPAGELRYPSYPQ-NQGWQFPGIGEFQCYDKYLRESFKAAAAKAGHSEWEL--PDDAGTYNDVPESTEFFKTN-GTYLTEKGKFFLTW 266
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.743e-34 Identity = 79/202 (39.11%), Postives = 119/202 (58.91%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM-GTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +WS Y ++ ++V++ GLKL + FH IP+P WV IGES IFYT++SG + K L++ VD+ P+ G+T I+VY ++ +SF+ + F+ I I +GLGP GELRYPS+ + + PG+GEFQC D+ + + A G+ W L P DA +Y++ P S FFK N G++ + G FFL+W Sbjct: 69 DWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVNIPIPQWVLDIGESDPDIFYTNRSGTRDKEYLTIGVDNKPIFHGRTAIEVYSDYMKSFRENMSDFLKSEVIIDIEVGLGPAGELRYPSYPQ-NQGWVFPGIGEFQCYDKYLKAEFKAAAARAGHSEWEL--PDDAGTYNDVPESTEFFKTN-GTYLTEKGKFFLTW 266
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.883e-34 Identity = 78/202 (38.61%), Postives = 116/202 (57.43%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFMGT-TITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +WS Y V ++V + GLKL + FH IP+P WV +G + IFYT++ G + L+L VDD P+ G+T +Q+Y ++ SF+ + K F+ TI I +GLGP GE+RYPS+ + ++ PG+GEF C D+ + + A G+P W L P DA Y+++P FFKDN G++ + G FFLSW Sbjct: 66 DWSAYKQVFDLVHEAGLKLQAIMSFHQCGGNVGDVVNIPIPQWVRDVGATDPDIFYTNRGGTRNIEYLTLGVDDQPLFHGRTAVQMYADYMASFRENMKKFLDAGTIVDIEVGLGPAGEMRYPSYPQ-SQGWVFPGIGEFICYDKYLEADFKAAAAKAGHPEWEL--PDDAGEYNDTPEKTQFFKDN-GTYLTEKGKFFLSW 263
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 6.624e-34 Identity = 78/202 (38.61%), Postives = 119/202 (58.91%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM-GTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +WS Y ++ ++V++ GLKL + FH IP+P WV IGES IFYT++SG + K L++ VD+ P+ G+T I++Y ++ +SF+ + F+ I I +GLGP GELRYPS+ + + PG+GEFQC D+ + + A G+ W L P DA +Y++ P S FFK N G++ + G FFL+W Sbjct: 69 DWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVTIPIPQWVLDIGESDPDIFYTNRSGTRDKEYLTVGVDNKPIFHGRTAIEIYSDYMKSFRENMSEFLKSELIIDIEVGLGPAGELRYPSYPQ-NQGWVFPGIGEFQCYDKYLKADFKAAAAKAGHSEWEL--PDDAGTYNDIPESTEFFKTN-GTYLTEKGKFFLTW 266
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 7.324e-33 Identity = 75/202 (37.13%), Postives = 118/202 (58.42%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHALKQP-----KIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFMGT-TITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +W Y ++ ++V++ GL L + FH IP+P WV IGES IFYT++SG + K L++ VD+ P+ G+T I++Y ++ +SF+ + F+ + I I +GLGP GELRYPS+ + ++ + P +GEFQC D+ + + G+P W L P DA Y++ P S FFK N G++ + G FFL+W Sbjct: 69 DWRAYRSLFQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQ-SQGWEFPRIGEFQCYDKYLKADFKAAVARAGHPEWEL--PDDAGKYNDVPESTGFFKSN-GTYVTEKGKFFLTW 266
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.249e-32 Identity = 76/202 (37.62%), Postives = 117/202 (57.92%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFMGT-TITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +WS Y V ++V++ GLKL + H IP+P WV +G+S IFYT++SG L+L VDD P+ G+T IQ+Y ++ +SF+ + F+ + I +GLGP GE+RYPS+ + ++ PGVGEF C D+ + + AE G+P W L DA +Y+++P FF DN G++++ G FFL+W Sbjct: 66 DWSAYRQVFKLVQEAGLKLQAIMSCHQCGGNVGDVVNIPIPQWVRDVGKSNPDIFYTNRSGLTNIEYLTLGVDDQPLFHGRTAIQLYADYMKSFRENMADFLDAGVVVDIEVGLGPAGEMRYPSYPQ-SQGWVFPGVGEFICYDKYLQADFKAAAEEAGHPEWDLL--DDAGTYNDTPEKTQFFADN-GTYQTDKGKFFLTW 263
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.249e-32 Identity = 75/202 (37.13%), Postives = 114/202 (56.44%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFMGT-TITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +WS Y + E+V+K GLKL + FH IP+P WV +G IFYTD G + L+L VD+ P+ G++ +Q+Y ++ SF+ + K F+ I I +GLGP GE+RYPS+ + + PG+GEF C D+ + + A A G+P W P+DA Y+++P FF+DN G++ + G FFL+W Sbjct: 66 DWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKEFLDAGVIVDIEVGLGPAGEMRYPSYPQ-SHGWSFPGIGEFICYDKYLQADFKAAAAAVGHPEWEF--PNDAGQYNDTPERTQFFRDN-GTYLTEKGRFFLAW 263
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.632e-32 Identity = 75/202 (37.13%), Postives = 113/202 (55.94%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFMGT-TITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +WS Y + E+V+K GLKL + FH IP+P WV +G IFYTD G + L+L VD+ P+ G++ +Q+Y ++ SF+ + K F+ I I +GLGP GE+RYPS+ + + PG+GEF C D+ + + A A G+P W P+D Y+++P FF+DN G++ S G FFL+W Sbjct: 66 DWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKDFLDAGVIVDIEVGLGPAGEMRYPSYPQ-SHGWSFPGIGEFICYDKYLQADFKAAAAAVGHPEWEF--PNDVGQYNDTPERTQFFRDN-GTYLSEKGRFFLAW 263
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.747e-32 Identity = 70/202 (34.65%), Postives = 115/202 (56.93%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHALKQP-----KIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM-GTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +W+ Y + +++ ++GLK+ + FH IP+P WV +G++ I+YT++ G + LS+ VD+LP+ G+T +Q+Y ++ SFK + + I I +GLGP GELRYPS+ + ++ PG+GEFQC D+ + + A G+P W L P DA Y++ P FFK + G++ S G FF++W Sbjct: 71 DWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRDVGDNDPDIYYTNRKGTRDIEYLSIGVDNLPLFAGRTAVQLYSDYMSSFKENMADLIEAGVIVDIEVGLGPAGELRYPSYPQ-SQGWVFPGIGEFQCYDKYLKKDFKEAAAKAGHPEWDL--PEDAGEYNDKPEETGFFKKD-GTYVSEKGKFFMTW 268
BLAST of CB250295 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4) HSP 1 Score: 133.65 bits (335), Expect = 6.855e-31 Identity = 71/202 (35.15%), Postives = 117/202 (57.92%), Query Frame = 3 Query: 3 NWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM-GTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQRHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSW 590 +WS Y + ++V+K GLK+ + FH IP+P W+ QIG+ IFYT+++G + + LSL VD+ + G+T +++Y++F ESF+ + F+ I I +G G GELRYPS+ + PG+GEFQC D+ M+ + + GN W + G A +Y+++P+ FF+ N G++++ G FFL+W Sbjct: 70 DWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIPQWILQIGDKNPDIFYTNRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESFRDNMADFLKAGDIVDIEVGCGAAGELRYPSYPE-TQGWVFPGIGEFQCYDKYMVADWKEAVKQAGNADWEMPG-KGAGTYNDTPDKTEFFRPN-GTYKTDMGKFFLTW 268 The following BLAST results are available for this feature:
BLAST of CB250295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250295 ID=CB250295; Name=CB250295; organism=Citrus sinensis; type=EST; length=590bpback to top |