CB250297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH33_ARATH (Indole-3-acetic acid-amido synthetase GH3.3 OS=Arabidopsis thaliana GN=GH3.3 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 8.046e-37 Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 3 Query: 3 TSYADTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TSYA+T TIPGHYVI+WELLVKD N P+DEV+ +CCL +EESLNSVYRQ RVAD SIGPLEIRVVKNGTFEELMDYAISRGASINQ Sbjct: 471 TSYAETKTIPGHYVIYWELLVKDQTNPPNDEVMARCCLEMEESLNSVYRQSRVADKSIGPLEIRVVKNGTFEELMDYAISRGASINQ 557
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH31_ARATH (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana GN=GH3.1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.373e-36 Identity = 71/87 (81.61%), Postives = 79/87 (90.80%), Query Frame = 3 Query: 3 TSYADTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TSYADT+TIPGHYV++WELLV+D A PS E L +CCL +EESLNSVYRQ RVADNS+GPLEIRVV+NGTFEELMDYAISRGASINQ Sbjct: 465 TSYADTSTIPGHYVLYWELLVRDGARQPSHETLTRCCLGMEESLNSVYRQSRVADNSVGPLEIRVVRNGTFEELMDYAISRGASINQ 551
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH34_ARATH (Indole-3-acetic acid-amido synthetase GH3.4 OS=Arabidopsis thaliana GN=GH3.4 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.164e-33 Identity = 67/88 (76.14%), Postives = 80/88 (90.91%), Query Frame = 3 Query: 3 TSYADTTTIPGHYVIFWELLVKDAANS-PSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TSYADT TIPGHYVI+WELL +D +N+ PSDEV+ +CCL +EESLN+VYRQ RV+D SIGPLEIRVV+NGTFEELMD++ISRG+SINQ Sbjct: 472 TSYADTKTIPGHYVIYWELLSRDQSNALPSDEVMAKCCLEMEESLNAVYRQSRVSDKSIGPLEIRVVQNGTFEELMDFSISRGSSINQ 559
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH38_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.003e-28 Identity = 63/88 (71.59%), Postives = 71/88 (80.68%), Query Frame = 3 Query: 3 TSYADTTTIPGHYVIFWELLVKDAANSPSD-EVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TS A T IPGHYVI+WELL K A + D + L +CCL +EE+LN+VYRQ RVAD SIGPLEIRVV+ GTFEELMDYAISRGASINQ Sbjct: 479 TSQACTKRIPGHYVIYWELLTKGAGATVVDADTLGRCCLEMEEALNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQ 566
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH38_ORYSI (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica GN=GH3.8 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 4.003e-28 Identity = 63/88 (71.59%), Postives = 71/88 (80.68%), Query Frame = 3 Query: 3 TSYADTTTIPGHYVIFWELLVKDAANSPSD-EVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TS A T IPGHYVI+WELL K A + D + L +CCL +EE+LN+VYRQ RVAD SIGPLEIRVV+ GTFEELMDYAISRGASINQ Sbjct: 479 TSQACTKRIPGHYVIYWELLTKGAGATVVDADTLGRCCLEMEEALNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQ 566
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH36_ARATH (Indole-3-acetic acid-amido synthetase GH3.6 OS=Arabidopsis thaliana GN=GH3.6 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.003e-28 Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 3 Query: 3 TSYADTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TSYADT++IPGHYV+FWEL + P V CCL +EESLNSVYRQGRV+D SIGPLEI++V++GTF++LMDYAIS GASINQ Sbjct: 485 TSYADTSSIPGHYVLFWELCLNGNTPIPPS-VFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKMVESGTFDKLMDYAISLGASINQ 570
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH31_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Oryza sativa subsp. japonica GN=GH3.1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.003e-28 Identity = 62/87 (71.26%), Postives = 67/87 (77.01%), Query Frame = 3 Query: 3 TSYADTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TSYAD TIPGHYV+FWEL A S V +CCL VEE+LNSVYRQGR D SIGPLEIRVV GTF++LMDYAISRGASINQ Sbjct: 475 TSYADAATIPGHYVLFWELRAGSTAVPAS--VFEECCLSVEEALNSVYRQGRACDRSIGPLEIRVVAEGTFDKLMDYAISRGASINQ 559
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH35_ARATH (Indole-3-acetic acid-amido synthetase GH3.5 OS=Arabidopsis thaliana GN=GH3.5 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.388e-27 Identity = 58/87 (66.67%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 3 TSYADTTTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TSYADT++IPGHYV+FWEL + P V CCL VEES N+VYRQGRV+D SIGPLEI++V+ GTF++LMDYAIS GASINQ Sbjct: 485 TSYADTSSIPGHYVLFWELCLDGNTPIPPS-VFEDCCLAVEESFNTVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQ 570
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH34_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.4 OS=Oryza sativa subsp. japonica GN=GH3.4 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.388e-27 Identity = 61/88 (69.32%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 3 TSYADT-TTIPGHYVIFWELLVKDAANSPSDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TSYADT TTIPGHYV+FWEL V CCL VEE LNSVYRQ R AD SIGPLEIRVV +GTF++LMDYA+SRGASINQ Sbjct: 483 TSYADTATTIPGHYVLFWELRSPAGGTPVPASVFEDCCLAVEEGLNSVYRQCRAADRSIGPLEIRVVADGTFDKLMDYALSRGASINQ 570
BLAST of CB250297 vs. ExPASy Swiss-Prot
Match: GH32_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.2 OS=Oryza sativa subsp. japonica GN=GH3.2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.346e-26 Identity = 60/93 (64.52%), Postives = 75/93 (80.65%), Query Frame = 3 Query: 3 TSYADTTTIPGHYVIFWELLVKD--AANSPSDE----VLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQ 263 TS AD TTIPGHYV++WEL+V++ A P++E V +CCL +EE+LN+VYRQGR + +IGPLEIRVV+ GTFEE+MDYAISRGASINQ Sbjct: 486 TSQADATTIPGHYVVYWELMVREGGAWPPPAEEEGRGVFERCCLEMEEALNAVYRQGRNGE-AIGPLEIRVVRAGTFEEVMDYAISRGASINQ 577 The following BLAST results are available for this feature:
BLAST of CB250297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250297 ID=CB250297; Name=CB250297; organism=Citrus sinensis; type=EST; length=263bpback to top |