CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3470 contig Csv1_Contig3470:152..923. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.032e-47
Identity = 101/226 (44.69%), Postives = 142/226 (62.83%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDS------DFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRN-----SQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRL--EGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPP 645
            R LVYD++ N SLD  +F ++ +        L W+ RYQ+A+  A+ LAYLH  CR  I+H D+KPENILLD  F   V+DFGL+KL+ R+ SRVLT +RGTRGYLAPE +    I+ K+DVYSYG++L E + GRR+      +E++  K+ +FP     Q +    ++ ++D RL      DEEE+ +L  VA WCIQ+    RP M  V+++LEG + V  PP
Sbjct:  174 RFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEHGISEKSDVYSYGIVLLEMIGGRRSISRVEVKETKKKKLEYFPR-IVNQKMRERKIMEIVDQRLIEVNEVDEEEVMKLVCVALWCIQEKSKKRPDMTMVIEMLEGRVPVNEPP 398          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 7.519e-43
Identity = 101/216 (46.76%), Postives = 132/216 (61.11%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG---VLDVTLPP 645
            RLLVY+++PNGSLD  LF EK    LDW TRY+I LG ARGL YLHE+ R  I+H D+K  NILLD++  PKVSDFGLAKL   + + + T + GT GYLAPE      +T K DVY++G++  E VSGR NS E+ + + R+   W A  + E    + L+D +L    + EE  R+  +A  C Q     RP M +VV +L G   V DVT  P
Sbjct:  762 RLLVYEYLPNGSLDQALFGEKTLH-LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEW-AWNLHEKGREVELIDHQLT-EFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSKP 974          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.419e-41
Identity = 96/216 (44.44%), Postives = 132/216 (61.11%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG---VLDVTLPP 645
            R+LVY+++PNGSLD  LF +K    LDW TRY+I LG ARGL YLHE+    I+H D+K  NILLD+   P++SDFGLAKL   + + + T + GT GYLAPE      +T K DVY++G++  E VSGR NS E+ + + ++   W A  + E S  I L+D +L  + + EE  R+  +A  C Q     RP M +VV +L G   + DVT  P
Sbjct:  763 RMLVYEYLPNGSLDQALFGDKTLH-LDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEW-AWNLHEKSRDIELIDDKLT-DFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEIGDVTSKP 975          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.200e-40
Identity = 90/205 (43.90%), Postives = 124/205 (60.49%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDF-LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            LLVY+F+ N SL   LF  +++   LDW TR +I +G ARGLAYLHE+ R  I+H DIK  N+LLD +  PK+SDFGLAKL   + + + T + GT GY+APE      +T KADVYS+G++  E V GR N  E       +   W  + + E +NL+ L+DPRL    + EE   +  +A  C   +   RPSM +VV++LEG
Sbjct:  694 LLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDW-VEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEG 897          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.016e-39
Identity = 85/214 (39.72%), Postives = 132/214 (61.68%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIP 651
            LLVY+++ N SL  +LF  KD   L+W  R++I LGTA G+AYLHE+    IIH DIK  NILL+ +F P+++DFGLA+L   + + + T + GT GY+APE +    +T KADVYS+G+++ E ++G+RN+   +D        W+   +   SN+   +DP L  N ++ E +RL  +   C+Q     RP+M  VV++++G L++  P  P
Sbjct:  393 LLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWS---LYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLEIHTPTQP 603          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.957e-39
Identity = 94/216 (43.52%), Postives = 127/216 (58.80%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLF-TEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPR 654
            LLVY+++ N SL   LF TEK    LDW TR +I +G A+GLAYLHE+ R  I+H DIK  N+LLD     K+SDFGLAKL   E + + T + GT GY+APE      +T KADVYS+G++  E VSG+ N+      +  +   WA     +GS L+ L+DP L  +  ++E  R+ N+A  C     T RP M  VV +LEG + V  P + R
Sbjct:  739 LLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGS-LLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQPPLVKR 953          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.861e-39
Identity = 92/211 (43.60%), Postives = 133/211 (63.03%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFS-RVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQ------ESEDGKVRFFPSWAAK-QIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            RLLV +++ NGSL + LF+E  +  LDW+ R+ IALG A+GLAYLH +C + +IHCD+KPENILLD  F PK++DFGL KL+ R  S + ++ +RGT GY+APE +S + ITAK DVYSYG++L E ++G R S+      E      +     +AK +  E S +   LD +L    +  +   L  +A  C+++D + RP+M   VQ L
Sbjct:  602 RLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVGGTDEVHSMLRKLVRMLSAKLEGEEQSWIDGYLDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTL 812          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.043e-39
Identity = 94/217 (43.32%), Postives = 133/217 (61.29%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPRA 657
            +LVY+F+PN SLD  +F E     L W+ R++I  G ARGL YLHE  +  IIH D+K  NILLDAE  PKV+DFG A+L   + +R  T  + GTRGY+APE ++   I+AK+DVYS+G+ML E +SG RN+    +G   F    A K+ VEG   I ++DP L  N    E+ +L  +   C+Q++ T RP+M  V+  L    +  + P+P+A
Sbjct:  418 ILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEGLAAF----AWKRWVEGKPEI-IIDPFLIEN-PRNEIIKLIQIGLLCVQENSTKRPTMSSVIIWLGS--ETIIIPLPKA 626          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 6.587e-39
Identity = 92/216 (42.59%), Postives = 127/216 (58.80%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLF-TEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPR 654
            LLVY+++ N SL   LF TEK    LDW TR ++ +G A+GLAYLHE+ R  I+H DIK  N+LLD     K+SDFGLAKL   E + + T + GT GY+APE      +T KADVYS+G++  E VSG+ N+      +  +   WA     +GS L+ L+DP L  +  ++E  R+ N+A  C     T RP M  VV +L+G + V  P + R
Sbjct:  737 LLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGS-LLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPPLVKR 951          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.602e-39
Identity = 93/218 (42.66%), Postives = 134/218 (61.47%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPRA 657
            ++LVY+F+PN SLD  +F ++    L W+ RY+I  G ARGL YLHE  +  IIH D+K  NILLDAE  PKV+DFG A+L   + +R  T  + GTRGY+APE ++   I+AK+DVYS+G+ML E +SG RN+    +G   F    A K+ VEG   I ++DP L       E+ +L  +   C+Q++ T RP+M  V+  L    +  + P+P+A
Sbjct:  422 QILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEGLAAF----AWKRWVEGKPEI-IIDPFLI-EKPRNEIIKLIQIGLLCVQENPTKRPTMSSVIIWLGS--ETNIIPLPKA 631          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
Y5005_ARATH5.032e-4744.69Probable receptor-like protein kinase At5g20050 OS... [more]
Y5614_ARATH7.519e-4346.76Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH2.419e-4144.44Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH1.200e-4043.90Probable LRR receptor-like serine/threonine-protei... [more]
CRK3_ARATH1.016e-3939.72Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y5343_ARATH2.957e-3943.52Probable LRR receptor-like serine/threonine-protei... [more]
KPRO_MAIZE3.861e-3943.60Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
CRK40_ARATH5.043e-3943.32Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
Y5344_ARATH6.587e-3942.59Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH8.602e-3942.66Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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