CB250329

Overview
NameCB250329
Unique NameCB250329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7608 contig Csv1_Contig7608:543..1234. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 1.517e-89
Identity = 151/171 (88.30%), Postives = 159/171 (92.98%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPAIVVPGIYYS+DKLLQTRIFSY+DTQRHRLGPNYLQLP NAPKCA HNNH++GFMNFMHRDEEI+YFPSRYDPVRHAEM P PP +C GRREKCII KENNF QPGERYRSWA DRQERFICRWVDALSDPRVTHEIR IWISYWSQA KS+GQKLAS LNVRP+I
Sbjct:  322 LAFCPAIVVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEINYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 317.39 bits (812), Expect = 4.569e-86
Identity = 141/171 (82.46%), Postives = 160/171 (93.57%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPAI+VPGI+YS+DKLLQTR+FSYADTQRHRLGPNYLQLPVNAPKCA HNNH++GFMNFMHRDEE++YFPSRYD VRHAE +PTPP +C G+RE+CII KENNF +PGERYR++ P+RQERFI RW+DALSDPR+THEIR IWISYWSQA KSLGQKLASRLNVRP+I
Sbjct:  322 LAFCPAIIVPGIHYSDDKLLQTRVFSYADTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDQVRHAEKYPTPPAVCSGKRERCIIEKENNFKEPGERYRTFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.329e-85
Identity = 141/171 (82.46%), Postives = 156/171 (91.23%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPAI+VPG+YYS+DKLLQTR+FSYADTQRHRLGPNYLQLP NAPKCA HNNH+DGFMNFMHRDEE++YFPSRYDPVRHAE  P PP I GG+REKC+I KENNF QPGERYRSW  DRQERF+ RWVDALSDPRVTHEIR IWISYWSQA +SLGQK+AS LN++P+I
Sbjct:  322 LAFCPAIIVPGVYYSDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.268e-85
Identity = 139/171 (81.29%), Postives = 158/171 (92.40%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPA++VPG+YYS+DKLLQTRIFSYADTQRHRLGPNYLQLP NAPKCA HNNH++G MNFMHRDEE++YFPSR+DPVRHAE HP PP +  G+R++C+I KENNF QPGERYR++APDRQERF+CRWVDALSDPRVTHEIR IWISYW+QA KSLGQKLASRLNVRP +
Sbjct:  322 LAFCPALIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPPNAPKCAHHNNHHEGLMNFMHRDEEVNYFPSRFDPVRHAERHPIPPPVLTGKRDRCMIEKENNFKQPGERYRTFAPDRQERFVCRWVDALSDPRVTHEIRSIWISYWTQADKSLGQKLASRLNVRPTM 492
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.268e-85
Identity = 140/171 (81.87%), Postives = 156/171 (91.23%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPAI+VPG+YYS+DKLLQTRIFSYADTQRHRLGPNYLQLP NAPKCA HNNH++GFMNFMHRDEE++YFPSR+DP RHAE +P PP +C G+RE+CII KENNF +PGERYRSW PDRQERF+ RWVDALSD RVTHEIR IWISYWSQA +SLGQKLAS LNVRP+I
Sbjct:  322 LAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 2.962e-85
Identity = 141/171 (82.46%), Postives = 155/171 (90.64%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPAIVVPG+YYS+DK+LQTRIFSYAD+QRHRLGPNYLQLP NAPKCA HNNH++GFMNF+HRDEE++YFPSRYDPVRHAE  P PP IC GRREKC I KENNF QPGERYRSWAPDRQ+RF  RWVDALSDPRVTHEIR +WISYWSQA +SLGQK+AS L+ RPNI
Sbjct:  322 LAFCPAIVVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 8.617e-85
Identity = 140/171 (81.87%), Postives = 155/171 (90.64%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPAI+VPG+YYS+DKLLQTRIFSYADTQRHRLGPNYLQLP N+PKCA HNNH+DGFMNFMHRDEE++YFPSRYDPVRHAE  P PP   GG+REKC+I KENNF QPGERYRSW  DRQERF+ RWVDALSDPRVTHEIR IWISYWSQA +SLGQK+AS LN++P+I
Sbjct:  322 LAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANSPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAERVPVPPRTLGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.125e-84
Identity = 141/171 (82.46%), Postives = 157/171 (91.81%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCP+++VPGIYYS+DKLLQTRIFSY+DTQRHRLGPNYLQLP NAPKCA HNNH++GFMNFMHRDEE++YFPSRYDPVRHAE HP P  +  G+REKCII KENNF QPGERYRS++ DRQERFI RW+DALSDPRVTHEIR IWISYWSQA KSLGQK+ASRLNVRP+I
Sbjct:  322 LAFCPSLIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.274e-84
Identity = 141/171 (82.46%), Postives = 157/171 (91.81%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCP+IVVPG+YYS+DK+LQTRIFSY+DTQR+RLGPNYLQLP NAPKCA HNNHYDG MNFMHRDEEIDYFPSRYD VRHAE++P P  +C G+REKCII KENNF QPGERYRS+ PDRQERFI RWV+ALSDPR+T+EIR IWI+YWSQA KSLGQKLASRLNVRP+I
Sbjct:  322 LAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDQVRHAEVYPIPSTVCSGKREKCIIQKENNFKQPGERYRSFTPDRQERFIRRWVEALSDPRITYEIRSIWITYWSQADKSLGQKLASRLNVRPSI 492
[Close]
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.274e-84
Identity = 141/171 (82.46%), Postives = 156/171 (91.23%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCP+IVVPG+YYS+DK+LQTRIFSY+DTQR+RLGPNYLQLP NAPKCA HNNHYDG MNFMHRDEEIDYFPSRYDPVRHAE +P P  +C G+REKC+I KENNF QPGERYRS+ PDRQERFI RWV+ LSDPR+T+EIR IWISYWSQA KSLGQKLASRLNVRP+I
Sbjct:  315 LAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDPVRHAEKYPIPSTMCTGKREKCVIQKENNFKQPGERYRSFTPDRQERFIRRWVETLSDPRITYEIRSIWISYWSQADKSLGQKLASRLNVRPSI 485
The following BLAST results are available for this feature:
BLAST of CB250329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
CATA1_GOSHI1.517e-8988.30Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA2_ARATH4.569e-8682.46Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA1_SOYBN1.329e-8582.46Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA_SOLAP2.268e-8581.29Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA1_CUCPE2.268e-8581.87Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA4_SOYBN2.962e-8582.46Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA3_SOYBN8.617e-8581.87Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA2_GOSHI1.125e-8482.46Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA2_SOLLC3.274e-8482.46Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA1_NICPL3.274e-8482.46Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]

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Properties
Property NameValue
Genbank descriptionEST0117 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ169 similar to catalase (acc# P17598), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250329 ID=CB250329; Name=CB250329; organism=Citrus sinensis; type=EST; length=692bp
CTTGCTTTCTGCCCTGCTATTGTGGTTCCTGGCATCTACTATTCAAATGA
TAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATACTCAGAGGCACC
GTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCACCCAAATGTGCT
CAGCACAACAATCATTATGACGGTTTCATGAATTTCATGCACAGGGATGA
GGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGA
TGCATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATA
ATTCCAAAGGAAAACAACTTCAACCAACCTGGAGAGAGATACCGATCTTG
GGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTAT
CTGATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGG
TCTCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGT
GAGGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTT
AGCAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCG
TTTTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCT
GTAATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTG
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