CB290197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_SCHPO (AdoMet-dependent rRNA methyltransferase spb1 OS=Schizosaccharomyces pombe GN=spb1 PE=1 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 2.010e-62 Identity = 124/266 (46.62%), Postives = 176/266 (66.17%), Query Frame = 1 Query: 10 SFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKALC 795 SFL + ++DLCAAPGGW+QVA + GSL++G+DL PI PI + +DIT +CR++++ ++ D+VLHDG+PNVG AW Q+A Q LV+ S+KLA +FL GTFVTKVFRS+DY+++L+ KQLF KVE KP +SR+ SAEI+++ YKAP K+DPR D + +F+ EP VD V K+KR R+GY D D TL K LA++F+ +N+P++ILG+ I F D C + + ++TTEE+ C Sbjct: 41 SFLEKAKVIIDLCAAPGGWLQVASKTCKPGSLIVGVDLAPIKPIPNCHTFVEDITSDKCRSQLRGYLKTWKA---DVVLHDGAPNVGSAWLQDAYGQAQLVLMSMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNVSAEIFVVCRGYKAPKKLDPRFTDPRTVFEEVQEPVTNVDAKVFHPEKRKRSREGYADDDYTLHKTVLASEFVTANDPIQILGTSAEIVFPKDDEECQRLYNLDVTTEEILLCC 303
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_EMENI (AdoMet-dependent rRNA methyltransferase spb1 OS=Emericella nidulans GN=spb1 PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.103e-60 Identity = 124/268 (46.27%), Postives = 172/268 (64.18%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKALC 795 FL S +LDLCAAPG W QVA + +P SL++G+DL PI PI ++ +QDIT +CRA ++ ++ D VLHDG+PNVG AW Q+A SQ LV++S+KLAT+FL GTFVTKVFRS+DY+ +L+ KQLF VE KP +SR+ SAEI+++ YKAP +IDP+ LD K++F + P V K+KR R+GYE+GD T K T+FI + +P+ ILGS ++F GD A + + TT+E++ C Sbjct: 41 FLEKSKVLLDLCAAPGSWCQVAAECMPAQSLIVGVDLAPIKPIPRVITFQQDITTEKCRATIRSHLKHWKA---DTVLHDGAPNVGTAWVQDAFSQAELVLESLKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFMSVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPKFLDSKHVFAELADPTPNNEAKVFNPEKKKRKREGYEEGDWTQFKEIPVTEFINTTDPIAILGSCNKLSFQQQPGGDLALATLDRLPETTDEIRNCC 305
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_ASPFU (AdoMet-dependent rRNA methyltransferase spb1 OS=Aspergillus fumigatus GN=spb1 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.192e-60 Identity = 121/268 (45.15%), Postives = 172/268 (64.18%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKALC 795 FL S +LDLCAAPG W QVA + +P S+++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG AW Q+A SQ LV+ S+KLAT+FL GTFVTKVFRS+DY+ +L+ KQLF VE KP +SR+ SAEI+++ +KAP +IDP+ LD K++F + P V K+KR R+GYE+GD T K T+FI + +P+ ILG+ ++F GD A + + E TT+E++ C Sbjct: 41 FLEKSKVLLDLCAAPGSWCQVAAECMPTQSIIIGVDLAPIKPIPRVITFQSDITTEKCRATIRQHLKHWKA---DTVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFLDPKHVFAELTDSTPNNEARVFNPEKKKRKREGYEEGDYTQFKEIPVTEFINTTDPIAILGTYNKLSFEQSPGGDLALATLNRLEETTDEIRTCC 305
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: RRMJ3_DICDI (rRNA methyltransferase 3 homolog OS=Dictyostelium discoideum GN=fsjC PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.475e-60 Identity = 123/261 (47.13%), Postives = 175/261 (67.05%), Query Frame = 1 Query: 10 SFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKAL 792 +FL ++ A LDLCAAPGGWMQVA + +PV SL++G+DLVPI +R + L +DIT +CR +KK ++ V D+ LHDG+PN+G +W Q+A Q L + ++KLAT+FL G FVTKVFR DY+S+++ +LF+KVE KP +SR+ASAEI+++ + P +IDP+LLD K++F+ ++ K VDVL K+K +R GYEDG T L K +DF+ SN L+ L + + F D A + HELTT E+K L Sbjct: 41 NFLGTAKACLDLCAAPGGWMQVASKYMPVQSLIVGVDLVPIRQVRNCIGLTEDITTQKCRTEIKKALKTWKV---DVCLHDGAPNMGTSWVQDAYQQAELTLHALKLATEFLTTGGWFVTKVFRGSDYNSLIWVFNKLFKKVESTKPPSSRNASAEIFVVCQGFLNPKRIDPKLLDPKFVFK-EIQEVKKVDVL-SEKKKVNRAGYEDGVTVLYKKGFISDFVNSNEHLQDLANFNAFEF-DEAAKIFEQHELTTPEIKEL 295
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_MAGGR (AdoMet-dependent rRNA methyltransferase SPB1 OS=Magnaporthe grisea GN=SPB1 PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.032e-58 Identity = 119/268 (44.40%), Postives = 172/268 (64.18%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE--PRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKALC 795 FL S +LDLCAAPG W QVA + +PV SL++G+DL PI PI ++ + DIT +CRA +++ ++ D VLHDG+PNVG AW Q++ +Q L + ++KLAT+FL GTFVTKVFRS+DY+S+L+ QLF+KVE KP +SR+ SAEI+++ +KAP +IDP+ LD + +F + P V + +KR RDGYE+GD T K A +FI S +P+ ILGS ++ GD A + ++ TT+E++ C Sbjct: 41 FLEKSKVLLDLCAAPGSWCQVAAEVMPVSSLIVGVDLAPIKPIPKVITFQSDITTEKCRATIRQHLKTWKA---DTVLHDGAPNVGTAWVQDSFNQAELTLQAMKLATEFLVEGGTFVTKVFRSKDYNSMLWVFNQLFKKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFLDPRAVFAELADPTPNNEAKVYKPEIKKRKRDGYEEGDYTQYKELPAYEFIQSTDPIAILGSTNRLSLEQSKNGDVALAVLEKLPETTDEIRTCC 305
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_YARLI (AdoMet-dependent rRNA methyltransferase SPB1 OS=Yarrowia lipolytica GN=SPB1 PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.300e-58 Identity = 117/260 (45.00%), Postives = 167/260 (64.23%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVK 786 FL S V+DLCAAPG W QVA Q PV SL++G D+VPI P+ ++ + DIT CR ++++ M+ D V+HDG+PNVG AWAQ+A +Q+ LV+ S+KLA +FL GTFVTKVFRS+DY+++++ +Q FEKVE KP +SR+ SAEI+++ +K+KAP KIDPRLLD KY+F+ V ++R R+GYE+G+ K DFI + P++ LG +T+ +IK+ E+ EE K Sbjct: 43 FLEKSKVVIDLCAAPGSWCQVASQLCPVNSLIIGCDIVPIKPLPNVITFQSDITTDHCRQQLRQYMKTWKA---DTVMHDGAPNVGMAWAQDAFTQSELVLQSLKLAVEFLNKGGTFVTKVFRSKDYNNLMWVFQQFFEKVEATKPPSSRNVSAEIFVVCLKFKAPKKIDPRLLDAKYVFEEVSQGNNNNEAKVFNPEVKRRKREGYEEGEYLQHKRLSILDFITDSTPIDNLGETNEMTW---TPRSIKEGEVDEEEEK 296
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_NEUCR (AdoMet-dependent rRNA methyltransferase spb-1 OS=Neurospora crassa GN=spb-1 PE=3 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 8.741e-58 Identity = 118/268 (44.03%), Postives = 169/268 (63.06%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF-----GDPACSAIKDHELTTEEVKALC 795 FL S LDLCAAPG W QV + +P S+++G+DL PI PI ++ + DIT +CRA ++ ++ D+VLHDG+PNVG AW Q++ +Q L + S+KLAT+FL GTFVTKVFRS+DY+S+L+ QLF KVE KP +SR+ SAEI+++ +KAP +IDP+LLD + +F+ P V +KR R+GYE+GD T K A++FI + +P+ ILG ++F GD A +A+ TTEE++ C Sbjct: 41 FLEKSKVALDLCAAPGSWCQVCAETMPTNSIIIGVDLAPIKPIPKVITFQSDITTEKCRATIRSHLKTWKA---DVVLHDGAPNVGTAWVQDSYNQAELALHSLKLATEFLIEGGTFVTKVFRSKDYNSLLWVCNQLFAKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKLLDPRSVFEDVAGPAPNNEAKVYNPEVKKRKREGYEEGDYTQFKEISASEFINTVDPIAILGQYNKLSFEQPKNGDVALAALDKLPETTEEIRLCC 305
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: RRMJ3_CHICK (Putative rRNA methyltransferase 3 OS=Gallus gallus GN=FTSJ3 PE=2 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 1.142e-57 Identity = 118/262 (45.04%), Postives = 172/262 (65.65%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 795 FL+ + A+LDLCAAPGGW+QVA + +PV SLV+G+DLVPI PI V+L++DIT +CR ++K ++ V D+VL+DG+PNVG +W +A SQ L + ++KLA +FL G F+TKVFRS+DY +L+ +Q F KV+ KP ASR+ SAEI+++ Y+AP KID + D KY F + V + V +++ +K+K +GY DGDTTL DF+ + NP++ L IT GD +++H TTEE++ C Sbjct: 41 FLQKARALLDLCAAPGGWLQVASKFMPVSSLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKV---DVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLLWIFQQFFHKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKFFDPKYAFKEVEVHAKSVSELV--SKKKPKAEGYADGDTTLYHRFTLMDFLKAPNPVDFLSKANEITLGD---GELENHSSTTEELRQCC 294
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_CANGA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Candida glabrata GN=SPB1 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.380e-55 Identity = 114/263 (43.35%), Postives = 166/263 (63.12%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKA 789 FL S V+DLCAAPG W QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR+R++ M+ D VLHDG+PNVG WAQ+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLFEKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ + + K+ R R GYE+GD L DF+ S +P+ +LG + T DP +K + TT E A Sbjct: 43 FLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSRLRGYMKTWKA---DTVLHDGAPNVGLGWAQDAFTQSHLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELPDGPQNMEAKIYNPEKKVRKRQGYEEGDHLLYHECSVLDFVKSEDPITVLGEMNKFTVEQDDPEWKILKRLKQTTNEFMA 302
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: RRMJ3_RAT (Putative rRNA methyltransferase 3 OS=Rattus norvegicus GN=Ftsj3 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.109e-55 Identity = 111/262 (42.37%), Postives = 171/262 (65.27%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 795 FL+ + A+LDLCAAPGGW+QVA + +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+PNVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+ KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K +GY +GD TL + TDF+ + NP++ L + I+ D + H TTE+++A C Sbjct: 41 FLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQGFLAPDKVDAKFFDPKFAFKEVEVQAKTVTELV--TKKKPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEISIDD---KELAQHPATTEDIRACC 294 The following BLAST results are available for this feature:
BLAST of CB290197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 404
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290197 ID=CB290197; Name=CB290197; organism=Citrus sinensis; type=EST; length=797bpback to top |