CB290209

Overview
NameCB290209
Unique NameCB290209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4989 contig Csv1_Contig4989:40..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.624e-69
Identity = 131/180 (72.78%), Postives = 145/180 (80.56%), Query Frame = -2
Query:  251 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLELS 790
            EG+APINL+VE+E HRATPGGTGGVKTIGNY            KGYSDVLYLDC++KRYLEEVSSCNIF+VK NVISTP IKGTILPGITRKS+IDVA++QGFQ           L+ADEVFCTGTAVVVSPVGS+TY GKRVSYGEG FG VS+QLY+VLT LQMG I D M WT+ LS
Sbjct:  234 EGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSMIDVARTQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKRVSYGEGTFGTVSKQLYTVLTSLQMGLIEDNMKWTVNLS 413          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.804e-66
Identity = 127/180 (70.56%), Postives = 142/180 (78.89%), Query Frame = -2
Query:  251 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLELS 790
            EG+APINL+VE E HRATPGGTGGVKTIGNY            KGYSDVLYLDC+HKRYLEEVSSCNIF+VK NVISTP IKGTILPGITRKSII+VA+SQGF+           ++ADEVFCTGTAVV+SPVGSITY  +R SYGE GFG VS+QLY+ LT LQMG   D MNWT++LS
Sbjct:  236 EGVAPINLIVETEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCLHKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSIIEVARSQGFKVEERNVTVDELVEADEVFCTGTAVVLSPVGSITYKSQRFSYGEDGFGTVSKQLYTSLTSLQMGLSEDNMNWTVQLS 415          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.619e-46
Identity = 97/180 (53.89%), Postives = 119/180 (66.11%), Query Frame = -2
Query:  251 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLELS 790
            EG+A +NL VE E  RA PGG GGVK+I NY            +G+SDVLYLD V K+YLEE SSCN+FVVKG  ISTP   GTIL GITRKS++++A  QG+Q           +DADEVFCTGTAVVV+PVG+ITY  KRV Y + G  +V Q+L SVL  +Q G I D   W  +++
Sbjct:  210 EGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEY-KTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.880e-39
Identity = 82/174 (47.13%), Postives = 114/174 (65.52%), Query Frame = -2
Query:  254 INLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 775
            +NL V+H+ HRA  GGTGGVK+  NY             G+SDVL+LD    R +EE+++CNIF+VKGN++STP   GTILPG+TRKSI ++A   G+Q           L+A+EVFCTGTAVVV  V ++T+  K+V Y   G  A+S +L+S+LT +QMG + DK  W +++
Sbjct:  179 LNLKVDHKYHRAHSGGTGGVKSCTNYSPVVKSLLEAKSAGFSDVLFLDAATGRNIEELTACNIFIVKGNIVSTPPTSGTILPGVTRKSISELAHDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKY-RTGEAALSTKLHSMLTNIQMGVVEDKKGWMVDI 351          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.347e-37
Identity = 81/174 (46.55%), Postives = 111/174 (63.79%), Query Frame = -2
Query:  254 INLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 775
            +NL V+H   RA  GGTGGVK+  NY             G+SDVL+LD    + +EEVS+CNIF++KGN++STP   GTILPGITRKSI ++A+  G++           L+A+EVFCTGTAVV+  V ++T+  KRV Y   G  A S +L+ +LT +QMG + DK  W +E+
Sbjct:  182 LNLKVDHNHRRAHFGGTGGVKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEEVSTCNIFILKGNIVSTPPTSGTILPGITRKSICELARDIGYEVQERDLSVDELLEAEEVFCTGTAVVIKAVETVTFHDKRVKY-RTGEEAFSTKLHLILTNIQMGVVEDKKGWMMEI 354          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 6.686e-37
Identity = 86/180 (47.78%), Postives = 110/180 (61.11%), Query Frame = -2
Query:  251 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLELS 790
            EG A +NL VE  + RA  GGTGGVK I NY            +G+SDVLYLD    + +EEVS+ NIF+VKGN I TP   GTIL GITRKSII++A   G++            +A+EVFCTGTA  V+ VGSIT+   R  Y + G G V+QQL S+L  +Q G I D  +W L+++
Sbjct:  206 EGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNTIVTPATSGTILGGITRKSIIEIALDLGYKVEERSVPVEELKEAEEVFCTGTAAGVASVGSITFKNTRTEY-KVGDGIVTQQLRSILVGIQTGSIQDTKDWVLQIA 384          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.434e-33
Identity = 68/174 (39.08%), Postives = 107/174 (61.49%), Query Frame = -2
Query:  254 INLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 775
            +NL +E +  RA P GTGGVK+I NY            +G+SD+L+LD    + +EE+ + N+F++KGNV+STP I GTILPG+TR  ++++ +  G+Q           LDADE FCTGTA +V+ + S+T+  K+  + + G   ++ +LY  L+ +Q G + D   WT+E+
Sbjct:  178 LNLKIEDQFRRAFPSGTGGVKSITNYCPVWIPLAEAKKQGFSDILFLDAATGKNIEELFAANVFMLKGNVVSTPTIAGTILPGVTRNCVMELCRDFGYQVEERTIPLVDFLDADEAFCTGTASIVTSIASVTFKDKKTGF-KTGEETLAAKLYETLSDIQTGRVEDTKGWTVEI 350          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE2_BACSU (Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis GN=ilvK PE=1 SV=5)

HSP 1 Score: 134.42 bits (337), Expect = 7.160e-31
Identity = 73/186 (39.25%), Postives = 103/186 (55.38%), Query Frame = -2
Query:  251 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLELS 790
            EGI P+ + VE E  RA  GGTG  KT GNY            KG+S VL+LD + K+Y+EEV S NIF      I TP++ G+IL GITR S+I + +  G Q           + A      +E F TGTA V+SPVG + +  + +S   G  G ++++LY  +T +Q G +AD+  WT E++
Sbjct:  172 EGIKPVKIAVESEFVRAVKGGTGNAKTAGNYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKINGEIVTPMLNGSILEGITRNSVIALLKHWGLQVSERKIAIDEVIQAHKDGILEEAFGTGTAAVISPVGELIWQDETLSINNGETGEIAKKLYDTITGIQKGAVADEFGWTTEVA 357          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE1_BACSU (Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis GN=ilvE PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.929e-29
Identity = 71/183 (38.80%), Postives = 96/183 (52.46%), Query Frame = -2
Query:  254 IAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDAD------EVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 784
            + P+ + VE E  RA  GG G  KT GNY             GY  VL+LD + K+Y+EEV S NIF V      TP + G+IL G+TR S I++ +S G               A       EVF TGTA VV+PVG +   GK V  G+G  G +S++LY  +T +Q+G +    NWT+E+
Sbjct:  174 LKPVRIYVEDEYVRAVNGGVGFAKTAGNYAASLQAQRKANELGYDQVLWLDAIEKKYVEEVGSMNIFFVINGEAVTPALSGSILSGVTRASAIELIRSWGIPVREERISIDEVYAASARGELTEVFGTGTAAVVTPVGELNIHGKTVIVGDGQIGDLSKKLYETITDIQLGKVKGPFNWTVEV 356          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_STAAW (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.493e-28
Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = -2
Query:  266 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 790
            E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++            ++       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY V T +Q G + DK  W
Sbjct:  171 ETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGW 351          
The following BLAST results are available for this feature:
BLAST of CB290209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
BCAT3_ARATH6.624e-6972.78Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT5_ARATH1.804e-6670.56Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT2_ARATH4.619e-4653.89Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT6_ARATH1.880e-3947.13Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT7_ARATH1.347e-3746.55Putative branched-chain-amino-acid aminotransferas... [more]
BCAT1_ARATH6.686e-3747.78Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT4_ARATH3.434e-3339.08Probable branched-chain-amino-acid aminotransferas... [more]
ILVE2_BACSU7.160e-3139.25Branched-chain-amino-acid aminotransferase 2 OS=Ba... [more]
ILVE1_BACSU3.929e-2938.80Branched-chain-amino-acid transaminase 1 OS=Bacill... [more]
ILVE_STAAW1.493e-2838.12Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa11_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290209 ID=CB290209; Name=CB290209; organism=Citrus sinensis; type=EST; length=809bp
TATATGTACCCAAGTGAAGCCAAATGGGATGCGGGATGTACTAAGTGGAA
CATACCCAGCAACAAATATTTCTCATAGTAACTTGAGAACAAATTTGAAT
ATCAAACATAAAGAAGGCAGCAAACTAAAGAAATCTGAGTCACCACCGTA
TATTTAGACCCGCCAACAGCTCAGTCCAAGGATCAGTGAACCTATGAAAG
ATGGACAGATTTGAAATGCAAACCAAAACCAGTAACTTAACCATGATCTA
GCTGAGCTCAAGGGTCCAATTCATCTTGTCCGCTATAAAACCCATCTGTA
GTTGGGTAAGCACGGAATATAATTGCTGTGACACCGCACCGAAACCACCC
TCCCCGTAGGATACCCTTTTACCAAGATAAGTGATGCTTCCCACAGGAGA
TACAACAACAGCTGTACCAGTACAAAAAACTTCATCAGCATCAAGTAACT
CCTCCACTGTCACAAGGCGTTCCTCAACCTGGAACCCTTGGCTTTGAGCA
ACATCAATTATACTCTTTCTTGTAATGCCAGGTAAGATAGTTCCTTTTAT
CACAGGAGTGGATATAACATTGCCCTTCACGACAAAAATGTTGCAAGAGG
AAACCTCTTCCAGGTATCTCTTGTGAACACAATCAAGGTAAAGAACATCA
GAATAACCTTTGGCCTTCGCAGCAGATTGAGCCTTAAGAACCGCAGCATA
GTTTCCTATAGTCTTTACGCCTCCAGTTCCCCCAGGAGTTGCACGATGTA
ATTCATGCTCAACAACCAAATTTATGGGTGCAATGCCTTCCCAACGTTTG
TTTGCTAAA
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